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Putative Salmonella enterica subsp. enterica serovar Typhimurium FSIS11704063 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Sequence length: | GenBank #: | |
Chromosome: | 4,889,552 bp | CP082421 |
plasmid pF18S031-1: | 326,166 bp | CP082423 |
plasmid pF18S031-2: | 94,075 bp | CP082424 |
REBASE acronym: Sen4063
Org_num: 55339
All begin CLJ14_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3255 | endoribonuclease SymE | |||
3260 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4063ORF3265P |
3265 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4063ORF3265P |
3270 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4063ORF3265P |
3275 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3105 | AAA family ATPase | |||
3110 | RM | StyUK1IV (100% identity) | GATCAG | Sen4063ORF3110P |
3115 | BREX system P-loop protein BrxC | |||
14220 | drug/metabolite exporter YedA | |||
14225 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen4063DcmP |
14230 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4063DcmP |
14235 | phosphohydrolase | |||
14470 | RusA family crossover junction | |||
14475 | M | M.StyUK1V (100% identity) | GATC | M.Sen4063ORF14475P |
14480 | PerC family transcriptional regulator | |||
21100 | DNA-binding transcriptional regulator Fis | |||
21105 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4063ORF21105P |
21110 | DUF2556 family protein | |||
21595 | ribulose-phosphate 3-epimerase | |||
21600 | M | M.StyTDamP (100% identity) | GATC | M.Sen4063DamP |
21605 | cell division protein DamX | |||
plasmid pF18S031-1 | ||||
23980 | DNA-binding protein | |||
23985 | M | M1.SenF8025ORFBP (100% identity) | M.Sen4063ORF23985P | |
23990 | 273 aa hypothetical protein | |||
25385 | 102 aa hypothetical protein | |||
25390 | M | M.SenF8025ORFAP (86% identity) | M.Sen4063ORF25390P | |
25395 | 203 aa hypothetical protein | |||
plasmid pF18S031-2 | ||||
26400 | 93 aa hypothetical protein | |||
26070 | M | M.StyUK1ORFAP (100% identity) | M.Sen4063ORF26070P | |
26065 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5780 | MFS transporter | |||
5785 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4063ORF5785P |
5790 | R | StyUK1IP (99% identity) | CAGAG | Sen4063ORF5785P |
5795 | small effector SsaA | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3080 | AAA domain-containing protein | |||
3085 | R | StyLTMrrP (100% identity) | Sen4063Mrr2P | |
3090 | protease Lon-related BREX system protein BrxL | |||
3270 | type I restriction-modification system | |||
3275 | R | StyUK1MrrP (100% identity) | Sen4063MrrP | |
3280 | BrnT family toxin |