Xanthomonas oryzae pv. oryzae C9-3 |
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Putative Xanthomonas oryzae pv. oryzae C9-3 RM systems
Ref: Chen,X.L. unpublished
REBASE ref # 33960
Complete sequence: 4,924,298 bp
GenBank #: CP060817
REBASE acronym: XorC93
Org_num: 56072
All begin H9N23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1130 | type II toxin-antitoxin system RelE/ParE family | |||
| 1135 | S | S.XorM9ORF17845P (91% identity) | S.XorC93ORF1140P | |
| 1140 | M | M.XorM9ORF17845P (100% identity) | M.XorC93ORF1140P | |
| 1145 | Abi family protein | |||
| 1150 | R | XorYN10ORF7750P (100% identity) | XorC93ORF1140P | |
| 1155 | 88 aa hypothetical protein | |||
| 1165 | restriction endonuclease | |||
| 1170 | M | M.XorPXO61ORF18385P (100% identity) | GGAYNNNNCTG | M.XorC93ORF1170P |
| 1175 | nucleotidyltransferase substrate binding | |||
| 1180 | S | S.XorM9ORF17815P (100% identity) | GGAYNNNNCTG | S.XorC93ORF1170P |
| 1185 | abortive infection family protein | |||
| 1190 | 224 aa hypothetical protein | |||
| 1195 | R | XorPXO61ORF18385P (100% identity) | GGAYNNNNCTG | XorC93ORF1170P |
| 1200 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15380 | integrase | |||
| 15385 | R | XorPXO61ORF3170P (100% identity) | CGATCG | XorC93ORF15390P |
| 15390 | M | M.XorPXO61ORF3170P (100% identity) | CGATCG | M.XorC93ORF15390P |
| 15395 | V | V.XorPXO61ORF3170P (100% identity) | CGATCG | V.XorC93ORF15390P |
| 15400 | plasmid mobilization relaxosome protein MobC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20370 | DEAD/DEAH box helicase family protein | |||
| 20375 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.XorC93ORF20375P |
| 20380 | Fic family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1160 | type II toxin-antitoxin system RelE/ParE family | |||
| 1165 | R | XorZ173MrrP (93% identity) | XorC93MrrP | |
| 1170 | SAM-dependent DNA methyltransferase | |||