Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N17S107 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N17S107 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Complete sequence: 4,919,556 bp
GenBank #: CP082608
REBASE acronym: SenGT01S
Org_num: 55163
All begin KZZ25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20220 | restriction endonuclease | |||
| 20225 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenGT01SORF20230P |
| 20230 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenGT01SORF20230P |
| 20235 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenGT01SORF20230P |
| 20240 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenGT01SDamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 3230 | DUF2732 domain-containing protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenGT01SORF3235P |
| 3240 | replication endonuclease | |||
| 5610 | IS6-like element IS26 family transposase | |||
| 5615 | M | M.StyCORF187P (49% identity) | M.SenGT01SORF5615P | |
| 5620 | thermonuclease family protein | |||
| 6245 | ead/Ea22-like family protein | |||
| 6250 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenGT01SORF6250P |
| 6255 | 92 aa hypothetical protein | |||
| 9560 | PerC family transcriptional regulator | |||
| 9565 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.SenGT01SORF9565P |
| 9570 | RusA family crossover junction | |||
| 9810 | phosphohydrolase | |||
| 9815 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenGT01SDcmP |
| 9820 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenGT01SDcmP |
| 9825 | drug/metabolite exporter YedA | |||
| 20380 | BREX system P-loop protein BrxC | |||
| 20385 | RM | StyUK1IV (100% identity) | GATCAG | SenGT01SORF20385P |
| 20390 | AAA family ATPase | |||
| 21870 | LexA family transcriptional regulator | |||
| 21875 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenGT01SORF21875P |
| 21880 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17925 | small effector SsaA | |||
| 17930 | R | StyUK1IP (99% identity) | CAGAG | SenGT01SORF17935P |
| 17935 | M | M.StyUK1I (100% identity) | CAGAG | M.SenGT01SORF17935P |
| 17940 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20215 | BrnT family toxin | |||
| 20220 | R | StyUK1MrrP (100% identity) | SenGT01SMrrP | |
| 20225 | type I restriction-modification system | |||