Escherichia coli 3/145 |
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Putative Escherichia coli 3/145 RM systems
Ref: Korotetskiy,I. et al. unpublished
REBASE ref # 33225
| Sequence length: | GenBank #: | |
| Chromosome: | 5,134,206 bp | CP082827 |
| plasmid unnamed1: | 139,267 bp | CP082828 |
| plasmid unnamed2: | 106,249 bp | CP082829 |
REBASE acronym: EcoWND2
Org_num: 53889
All begin K8B73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9290 | L,D-transpeptidase | |||
| 9295 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoWND2ORF9295P |
| 9300 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoWND2ORF9295P |
| 9305 | restriction system-associated AAA family ATPase | |||
| 21125 | adenine/cytosine-specific restriction | |||
| 21130 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoWND2ORF21135P |
| 21135 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoWND2ORF21135P |
| 21140 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoWND2ORF21135P |
| 21145 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2430 | DUF2556 family protein | |||
| 2435 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoWND2ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 9620 | phosphohydrolase | |||
| 9625 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoWND2DcmP |
| 9630 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoWND2DcmP |
| 9635 | drug/metabolite exporter YedA | |||
| 13890 | NinE family protein | |||
| 13895 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoWND2ORF13895P |
| 13900 | recombination protein NinB | |||
| plasmid unnamed1 | ||||
| 25430 | 103 aa hypothetical protein | |||
| 25435 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoWND2ORF25435P |
| 25440 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25785 | 73 aa hypothetical protein | |||
| 25790 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoWND2ORF25790P | |
| 25795 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21120 | GTPase | |||
| 21125 | R | Ssp28760MrrP (100% identity) | EcoWND2MrrP | |
| 21130 | type I restriction-modification system | |||
| 21145 | endoribonuclease SymE | |||
| 21150 | R | SenHNK130McrBP (100% identity) | EcoWND2McrBP | |
| 21155 | R | SenHNK130McrCP (100% identity) | EcoWND2McrCP | |