Raoultella planticola SCLZS62 |
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Putative Raoultella planticola SCLZS62 RM systems
Ref: Zhang,L. and Li,Y. unpublished
REBASE ref # 33123
| Sequence length: | GenBank #: | |
| Chromosome: | 5,490,846 bp | CP082168 |
| plasmid p2_SCLZS62: | 110,781 bp | CP082170 |
| plasmid p3_SCLZS62: | 116,031 bp | CP082171 |
| plasmid p4_SCLZS62: | 125,664 bp | CP082172 |
| plasmid p5_SCLZS62: | 173,509 bp | CP082173 |
| plasmid p6_SCLZS62: | 266,366 bp | CP082174 |
| plasmid p7_SCLZS62: | 334,207 bp | CP082175 |
| plasmid p9_SCLZS62: | 74,646 bp | CP082177 |
REBASE acronym: RplS62
Org_num: 55071
All begin K6028_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22505 | restriction endonuclease | |||
| 22510 | M | M.Rpl52256ORF44110P (96% identity) | M.RplS62ORF22510P | |
| 22515 | S | S.Rel01CORF22830P (60% identity) | S.RplS62ORF22510P | |
| 22520 | type I restriction endonuclease | |||
| ??? | R | RorWM1ORF22825P (80% identity) | RplS62ORF22510P | |
| 22535 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1995 | cell division protein DamX | |||
| 2000 | M | M.RplWA001DamP (100% identity) | GATC | M.RplS62DamP |
| 2005 | ribulose-phosphate 3-epimerase | |||
| 9295 | phosphohydrolase | |||
| 9300 | M | M.RplWA001DcmP (100% identity) | M.RplS62DcmP | |
| 9305 | V | V.RplWA001DcmP (100% identity) | V.RplS62DcmP | |
| 9310 | drug/metabolite exporter YedA | |||
| plasmid p2_SCLZS62 | ||||
| 26005 | SOS response-associated peptidase family | |||
| 26010 | M | M.YpeZORF72P (100% identity) | M.RplS62ORF26010P | |
| 26015 | 73 aa hypothetical protein | |||
| plasmid p3_SCLZS62 | ||||
| 27070 | 280 aa hypothetical protein | |||
| 27075 | M | M.SphSSU5ORF88P (96% identity) | GATC | M.RplS62ORF27075P |
| 27080 | 76 aa hypothetical protein | |||
| plasmid p4_SCLZS62 | ||||
| 27685 | 76 aa hypothetical protein | |||
| 27690 | M | M.SmaBWH35ORF25885P (100% identity) | M.RplS62ORF27690P | |
| 27695 | 73 aa hypothetical protein | |||
| plasmid p5_SCLZS62 | ||||
| 28030 | 120 aa hypothetical protein | |||
| 28035 | M | M.Vch11614ORFCP (100% identity) | M.RplS62ORF28035P | |
| 28040 | 149 aa hypothetical protein | |||
| 28370 | 100 aa hypothetical protein | |||
| 28375 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.RplS62ORF28375P |
| 28380 | 143 aa hypothetical protein | |||
| plasmid p6_SCLZS62 | ||||
| 30215 | 76 aa hypothetical protein | |||
| 30220 | M | M.Sen3039ORF24445P (100% identity) | GATC | M.RplS62ORF30220P |
| 30225 | DNA polymerase III subunit beta | |||
| plasmid p7_SCLZS62 | ||||
| 30835 | 144 aa hypothetical protein | |||
| 30840 | M | M.Rpl80511ORFCP (100% identity) | CCWGG | M.RplS62ORF30840P |
| 30845 | R | Rpl80511ORFCP (100% identity) | CCWGG | RplS62ORF30840P |
| 30850 | 82 aa hypothetical protein | |||
| 30935 | 81 aa hypothetical protein | |||
| 30940 | M | M.RplNDM1ORF92P (97% identity) | M.RplS62ORF30940P | |
| 30945 | 1126 aa hypothetical protein | |||
| plasmid p9_SCLZS62 | ||||
| 32495 | ABC transporter | |||
| 32500 | R | Ksp4251ORF25075P (100% identity) | RplS62ORF32505P | |
| 32505 | M | M.Rpl80511ORFGP (100% identity) | M.RplS62ORF32505P | |
| 32510 | recombinase family protein | |||
| 32875 | 73 aa hypothetical protein | |||
| 32880 | M | M.Kva19ORF3555P (100% identity) | M.RplS62ORF32880P | |
| 32885 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22495 | 146 aa hypothetical protein | |||
| 22500 | R | Ror9155McrBP (99% identity) | RplS62McrBP | |
| 22505 | R | Rpl52256McrCP (99% identity) | RplS62McrCP | |
| 22510 | type I restriction-modification system subunit | |||