Avibacterium paragallinarum p4chr1 |
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Putative Avibacterium paragallinarum p4chr1 RM systems
Ref: Wang,H. and Xu,J. unpublished
REBASE ref # 33154
Complete sequence: 2,774,989 bp
GenBank #: CP081939
REBASE acronym: Apap4
Org_num: 52915
All begin K5O18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1650 | fatty acid metabolism transcriptional regulator | |||
| 1655 | M | M.ApaZ3CORFEP (100% identity) | M.Apap4ORF1655P | |
| 1660 | DNA binding domain-containing protein | |||
| 1665 | S | S.ApaZ3CORFEP (100% identity) | S.Apap4ORF1655P | |
| 1670 | ATP F0F1 synthase synthase | |||
| 1675 | R | ApaZ3CORFEP (100% identity) | Apap4ORF1655P | |
| 1680 | pyridoxal phosphate-dependent aminotransferase | |||
| 12160 | DUF262 domain-containing protein | |||
| 12165 | R | ApaZ3CORFPP (100% identity) | Apap4ORF12165P | |
| 12170 | S | S1.ApaZ3CORFPP (100% identity) | S1.Apap4ORF12165P | |
| 12175 | S | S2.ApaZ3CORFPP (100% identity) | S2.Apap4ORF12165P | |
| 12180 | S | S3.ApaZ3CORFPP (100% identity) | S3.Apap4ORF12165P | |
| 12185 | MFS transporter | |||
| 12830 | metallophosphoesterase | |||
| 12840 | R | ApaZ3CORFDP (100% identity) | Apap4ORF12860P | |
| 12845 | 259 aa hypothetical protein | |||
| 12850 | 308 aa hypothetical protein | |||
| 12855 | S | S.ApaZ3CORFDP (59% identity) | S.Apap4ORF12860P | |
| 12860 | M | M.Apa174ORF800P (93% identity) | M.Apap4ORF12860P | |
| 12865 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 490 | 3-dehydroquinate synthase | |||
| 495 | M | M.ApasMORFNP (100% identity) | GATC | M.Apap4ORF495P |
| 500 | DciA family protein | |||
| 2210 | DNA methyltransferase | |||
| 2215 | M | M.Apap4ORF12800P (100% identity) | M.Apap4ORF2215P | |
| 2220 | 62 aa hypothetical protein | |||
| 3100 | 113 aa hypothetical protein | |||
| 3105 | M | M.ApaZ3CORFJP (100% identity) | M.Apap4ORF3105P | |
| 3110 | lysozyme | |||
| 3190 | type II toxin-antitoxin system HicA family | |||
| 3195 | M | M.Apap4ORF8230P (100% identity) | M.Apap4ORF3195P | |
| 3200 | replication endonuclease | |||
| 7285 | recombination protein NinB | |||
| 7290 | M | M.ApaZ3CORFKP (100% identity) | M.Apap4ORF7290P | |
| 7295 | ATP-binding protein | |||
| 7440 | 103 aa hypothetical protein | |||
| 7445 | M | M2.ApaZ3CORFBP (100% identity) | M1.Apap4ORF7445P | |
| 7450 | M | M.ApaAP01ORF7020P (28% identity) | M2.Apap4ORF7445P | |
| 7455 | 287 aa hypothetical protein | |||
| 7710 | DUF1367 family protein | |||
| 7715 | M | M.ApaZ3CORFLP (100% identity) | M.Apap4ORF7715P | |
| 7720 | 227 aa hypothetical protein | |||
| 7920 | KilA-N domain-containing protein | |||
| 7925 | M | M1.ApaZ3CORFCP (100% identity) | M1.Apap4ORF7925P | |
| 7930 | M | M2.Apap4ORF7445P (82% identity) | M2.Apap4ORF7925P | |
| 7935 | 287 aa hypothetical protein | |||
| 8225 | nucleoside triphosphate pyrophosphohydrolase | |||
| 8230 | M | M.Apap4ORF3195P (100% identity) | M.Apap4ORF8230P | |
| 8235 | replication endonuclease | |||
| 12795 | DNA methyltransferase | |||
| 12800 | M | M.Apap4ORF2215P (100% identity) | M.Apap4ORF12800P | |
| 12805 | 62 aa hypothetical protein | |||
| 13050 | 153 aa hypothetical protein | |||
| 13055 | M | M1.ApaZ3CORFAP (100% identity) | M1.Apap4ORF13055P | |
| 13060 | M | M2.ApaZ3CORFAP (100% identity) | M2.Apap4ORF13055P | |
| 13065 | RM | ApaZ3CORFAP (100% identity) | Apap4ORF13055P | |
| 13070 | 30S ribosomal protein S12 methylthiotransferase | |||
| 13525 | DNA methyltransferase | |||
| 13530 | M | M.Apap4ORF2215P (98% identity) | M.Apap4ORF13530P | |
| 13535 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2985 | 381 aa hypothetical protein | |||
| ??? | M | M.ApaZ3CORFIBP (59% identity) | M.Apap4ORF2990P | |
| 3000 | R | ApaZ3CORFIP (100% identity) | Apap4ORF2990P | |
| 3005 | IS3 family transposase | |||