Escherichia coli WW2 |
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Putative Escherichia coli WW2 RM systems
Ref: Wan,C. et al. unpublished
REBASE ref # 33045
| Sequence length: | GenBank #: | |
| Chromosome: | 4,915,609 bp | CP081881 |
| plasmid unnamed2: | 114,381 bp | CP081887 |
| plasmid unnamed3: | 103,282 bp | CP081888 |
REBASE acronym: EcoWW2
Org_num: 53945
All begin K5O11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9205 | M48 family metallopeptidase | |||
| 9210 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | EcoWW2ORF9230P |
| 9215 | macro domain-containing protein | |||
| 9220 | DUF4433 domain-containing protein | |||
| 9225 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.EcoWW2ORF9230P |
| 9230 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoWW2ORF9230P |
| 9235 | transcription factor | |||
| plasmid unnamed3 | ||||
| 25110 | IS1 family transposase | |||
| 24535 | R | Eco13148IP (99% identity) | GACCNNNNNRTTC | EcoWW2ORF24545P |
| 24540 | S | S.EcoB093ORF2882P (99% identity) | GACCNNNNNRTTC | S.EcoWW2ORF24545P |
| 24545 | M | M.Eco46C16ORF14780P (99% identity) | GACCNNNNNRTTC | M.EcoWW2ORF24545P |
| 24550 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2090 | cell division protein DamX | |||
| 2095 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoWW2DamP |
| 2100 | ribulose-phosphate 3-epimerase | |||
| 2620 | DUF2556 family protein | |||
| 2625 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoWW2ORF2625P |
| 2630 | DNA-binding transcriptional regulator Fis | |||
| 13695 | drug/metabolite exporter YedA | |||
| 13700 | V | V.EcoTCM3e1DcmP (100% identity) | V.EcoWW2DcmP | |
| 13705 | M | M.EcoSTEFF1DcmP (100% identity) | CCWGG | M.EcoWW2DcmP |
| 13710 | phosphohydrolase | |||
| 16970 | 63 aa hypothetical protein | |||
| 16975 | M | M.EcoVET2ORF32730P (100% identity) | M.EcoWW2ORF16975P | |
| 16980 | TrmB family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 24135 | 102 aa hypothetical protein | |||
| 24140 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoWW2ORF24140P | |
| 24145 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 25030 | 73 aa hypothetical protein | |||
| 25035 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoWW2ORF25035P |
| 25040 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20215 | 125 aa hypothetical protein | |||
| 20220 | R | EcoS1268ORF2485P (100% identity) | EcoWW2ORF20220P | |
| 20230 | NADPH-dependent aldehyde reductase Ahr | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7015 | recombination protein NinB | |||
| 7020 | M | M.SflLIN11ORF7170P (100% identity) | GATC | M.EcoWW2ORF7020P |
| 7025 | protein ninD | |||