Flavobacterium psychrophilum CHN38 |
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Putative Flavobacterium psychrophilum CHN38 RM systems
Ref: Chen,F. et al. unpublished
REBASE ref # 33039
Complete sequence: 2,830,982 bp
GenBank #: CP081494
REBASE acronym: FpsCHN38
Org_num: 51996
All begin K5L04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7295 | virulence-associated E family protein | |||
| 7300 | M | M.Par1023ORF14305P (81% identity) | M.FpsCHN38ORF7300P | |
| 7305 | S | S.CspHR92ORF7035P (46% identity) | S.FpsCHN38ORF7300P | |
| 7310 | DNA damage-inducible protein D | |||
| 7315 | virulence RhuM family protein | |||
| 7320 | DNA binding domain-containing protein | |||
| 7325 | R | Psp1811ORFAP (75% identity) | FpsCHN38ORF7300P | |
| 7330 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6700 | 131 aa hypothetical protein | |||
| 6705 | M | M.Vme75I (56% identity) | M.FpsCHN38ORF6705P | |
| 6710 | NADAR family protein | |||
| 6820 | 186 aa hypothetical protein | |||
| 6825 | M | M.FpsCHN46ORF11165P (100% identity) | M.FpsCHN38ORF6825P | |
| 6830 | R | FpsCHN46ORF11165P (100% identity) | FpsCHN38ORF6825P | |
| 6835 | 126 aa hypothetical protein | |||
| 8540 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 8545 | RM | FpsR7ORF2545P (63% identity) | FpsCHN38ORF8545P | |
| 8550 | 513 aa hypothetical protein | |||
| 9220 | thymidylate synthase | |||
| 9225 | M | M.Fps1510ORF49P (93% identity) | M.FpsCHN38ORF9225P | |
| 9230 | 67 aa hypothetical protein | |||
| 9930 | 3-oxoacid CoA-transferase subunit B | |||
| 9935 | RM | FpsTRORFCP (77% identity) | FpsCHN38ORF9935P | |
| 9940 | CoA transferase subunit A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7325 | type I restriction endonuclease subunit R | |||
| 7330 | R | AspHY041McrBP (30% identity) | FpsCHN38McrBP | |
| 7335 | 82 aa hypothetical protein | |||
| 7340 | R | AluL182McrCP (49% identity) | FpsCHN38McrCP | |
| 7345 | transposase | |||
| 9655 | 50 aa hypothetical protein | |||
| 9660 | M | M.FspF70ORF3580P (86% identity) | M.FpsCHN38ORF9660P | |
| 9665 | ATP-binding protein | |||