Campylobacter jejuni isolate 1 |
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Putative Campylobacter jejuni isolate 1 RM systems
Ref: Astvaldsson,A. and Skarin,J. unpublished
REBASE ref # 33033
Complete sequence: 1,805,160 bp
GenBank #: OU532558
REBASE acronym: Cje1
Org_num: 51980
All begin CJ121364_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1690 | NAD(P)-dependent alcohol dehydrogenase | |||
| 1691 | R | Cje17fORF8240P (100% identity) | CYAANNNNNNNNTAYC | Cje1ORF1695P |
| 1692 | AAA family ATPase | |||
| 1693 | S | S.Csp93256ORF7590P (100% identity) | CYAANNNNNNNNTAYC | S.Cje1ORF1695P |
| 1694 | Fic family protein | |||
| ??? | M | M.Csp6468ORF4605P (92% identity) | CYAANNNNNNNNTAYC | M.Cje1ORF1695P |
| 1697 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | PD-(D/E)XK nuclease family protein | |||
| 36 | RM | Cje10632ORF330P (97% identity) | Cje1ORF36P | |
| 37 | acyltransferase | |||
| 206 | translation initiation factor IF-3 | |||
| 207 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Cje1ORF207P |
| 208 | autotransporter outer membrane beta-barrel domain-containing protein | |||
| 242 | dihydroorotase | |||
| 243 | RM | CjeCJ071ORF1090P (100% identity) | Cje1ORF243P | |
| 244 | class I SAM-dependent methyltransferase | |||
| 467 | virion morphogenesis protein | |||
| 468 | M | M.CjeR14ORF905P (100% identity) | M.Cje1ORF468P | |
| 469 | 95 aa hypothetical protein | |||
| 716 | acetate kinase | |||
| 717 | RM | Csp6468ORF3040P (100% identity) | GKAAYC | Cje1ORF717P |
| 718 | 163 aa hypothetical protein | |||
| 1140 | NAD-dependent deacetylase | |||
| 1141 | RM | Csp6468ORF6880P (100% identity) | CAANNNNNNNTGG | Cje1ORF1141P |
| 1142 | endonuclease MutS2 | |||
| 1302 | 60 aa hypothetical protein | |||
| 1303 | M | M.CjeR14ORF905P (99% identity) | M.Cje1ORF1303P | |
| 1304 | phage virion morphogenesis protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 270 | serine/threonine protein kinase | |||
| 271 | M | M.Csp6468ORF7895P (100% identity) | YGAATV | M.Cje1ORF271P |
| 272 | R | Csp7460ORF3055P (100% identity) | YGAATV | Cje1ORF271P |
| 273 | AcfC family glycoprotein adhesin PEB3 | |||
| 661 | hydrogenase maturation nickel metallochaperone | |||
| 662 | M | M.Csp6468ORF3335P (100% identity) | M.Cje1ORF662P | |
| 663 | R | Csp93227ORF3420P (100% identity) | Cje1ORF662P | |
| 664 | DNA polymerase III subunit delta | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 138 | ribosome maturation factor RimP | |||
| 139 | R | Cje10617McrBP (100% identity) | Cje1McrBP | |
| 140 | R | Cje65411McrCP (99% identity) | Cje1McrCP | |
| 141 | metal ABC transporter permease | |||