Escherichia coli BL21(DE3) |
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Putative Escherichia coli BL21(DE3) RM systems
Ref: Thakkar,M. et al. unpublished
REBASE ref # 32734
Complete sequence: 4,498,411 bp
GenBank #: CP081489
REBASE acronym: EcoDE3
Org_num: 51981
All begin K5T46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18820 | adenine/cytosine-specific restriction | |||
| 18825 | R | Ssp28760ORF3465P (100% identity) | EcoDE3ORF18830P | |
| 18830 | M | M.Ssp28760ORF3465P (100% identity) | M.EcoDE3ORF18830P | |
| 18835 | S | S2.Ssp28760ORF3465P (99% identity) | S.EcoDE3ORF18830P | |
| 18840 | 206 aa hypothetical protein | |||
| 21470 | endoribonuclease SymE | |||
| 21475 | S | S2.EcoNico21ORF21675P (100% identity) | S.EcoDE3ORF21475P | |
| 21480 | type III secretion system effector EspX1 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7640 | ribulose-phosphate 3-epimerase | |||
| 7645 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDE3DamP |
| 7650 | cell division protein DamX | |||
| 10630 | DNA-binding transcriptional regulator Fis | |||
| 10635 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoDE3ORF10635P |
| 10640 | DUF2556 family protein | |||
| 20690 | transcription factor | |||
| 20695 | R | Ssp28760ORF14350P (100% identity) | RCSRC | EcoDE3ORF20695P |
| 20700 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18815 | GTPase | |||
| 18820 | R | Ssp28760MrrP (100% identity) | EcoDE3MrrP | |
| 18825 | type I restriction-modification system | |||
| 21455 | DUF1998 domain-containing protein | |||
| 21460 | R | Ssp28760McrCP (100% identity) | EcoDE3McrCP | |
| 21465 | R | Ssp28760McrBP (100% identity) | EcoDE3McrBP | |
| 21470 | endoribonuclease SymE | |||