Escherichia coli 25POL |
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Putative Escherichia coli 25POL RM systems
Ref: Cao,G. and Zhong,C. unpublished
REBASE ref # 29140
| Sequence length: | GenBank #: | |
| Chromosome: | 5,131,428 bp | CP081010 |
| plasmid p25POL-A: | 49,741 bp | CP081011 |
REBASE acronym: Eco25POL
Org_num: 50595
All begin K3072_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20885 | restriction endonuclease | |||
| 20890 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco25POLORF20890P |
| 20895 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco25POLORF20890P |
| 20900 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco25POLORF20890P |
| 20905 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco25POLDamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2400 | DUF2556 family protein | |||
| 2405 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco25POLORF2405P |
| 2410 | DNA-binding transcriptional regulator Fis | |||
| 9750 | phosphohydrolase | |||
| 9755 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco25POLDcmP |
| 9760 | V | V.EcosC25DcmP (100% identity) | V.Eco25POLDcmP | |
| 9765 | drug/metabolite exporter YedA | |||
| 21235 | McrC family protein | |||
| 21240 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco25POLORF21245P |
| 21245 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco25POLORF21245P |
| 21250 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco25POLORF21245P |
| 21255 | helix-turn-helix domain-containing protein | |||
| plasmid p25POL-A | ||||
| 24645 | 89 aa hypothetical protein | |||
| 24650 | M | M.EcoZLWTORF24570P (100% identity) | M.Eco25POLORF24650P | |
| 24660 | 92 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21215 | glycosyltransferase | |||
| 21220 | R | Ecos9McrBP (27% identity) | Eco25POLMcrBP | |
| 21225 | IS3-like element ISEc52 family transposase | |||
| 21230 | AAA family ATPase | |||
| 21235 | R | EcosS9McrCP (100% identity) | Eco25POLMcrCP | |
| 21240 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13955 | NinE family protein | |||
| 13960 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco25POLORF13960P |
| 13965 | recombination protein NinB | |||