Shewanella xiamenensis NUITM-VS1 |
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Putative Shewanella xiamenensis NUITM-VS1 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 32924
| Sequence length: | GenBank #: | |
| Chromosome: | 5,093,620 bp | AP025014 |
| plasmid pNUITM-VS1_1: | 131,441 bp | AP025015 |
REBASE acronym: SxiVS1
Org_num: 51676
All begin NUITMVS1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 32010 | ATPase AAA | |||
| 32020 | R | VchSXTORFAP (100% identity) | SxiVS1ORF32050P | |
| 32030 | 384 aa hypothetical protein | |||
| 32040 | S | S.VchSXTORFAP (100% identity) | S.SxiVS1ORF32050P | |
| 32050 | M | M.VchSXTORFAP (100% identity) | M.SxiVS1ORF32050P | |
| 32060 | WYL domain-containing protein | |||
| 42250 | 373 aa hypothetical protein | |||
| 42260 | M | M.SxiVS2ORFAP (100% identity) | M.SxiVS1ORF42260P | |
| 42270 | S | S.SxiVS2ORFAP (98% identity) | S.SxiVS1ORF42260P | |
| 42280 | R | SxiVS2ORFAP (100% identity) | SxiVS1ORF42260P | |
| 42290 | 229 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2610 | ATPase AAA | |||
| 2620 | M | M.SxiVS2DamP (100% identity) | GATC | M.SxiVS1DamP |
| 2630 | 121 aa hypothetical protein | |||
| 12210 | 72 aa hypothetical protein | |||
| 12220 | M | M.SxiCQY1ORF6135P (99% identity) | M.SxiVS1ORF12220P | |
| 12230 | 54 aa hypothetical protein | |||
| 23780 | 599 aa hypothetical protein | |||
| 23790 | RM | SspANAORF1819P (79% identity) | SxiVS1ORF23790P | |
| 23800 | 1157 aa hypothetical protein | |||
| 32020 | DEAD/DEAH box helicase | |||
| 32030 | R | Vch2387ORFEP (100% identity) | SxiVS1ORF32030P | |
| 32040 | 234 aa hypothetical protein | |||
| 36700 | 566 aa hypothetical protein | |||
| 36710 | M | M.SspLZH2ORF17075P (97% identity) | M.SxiVS1ORF36710P | |
| 36720 | glycine dehydrogenase (decarboxylating) | |||
| plasmid pNUITM-VS1_1 | ||||
| 44810 | 138 aa hypothetical protein | |||
| 44820 | M | M.SspLC6ORF23255P (98% identity) | M.SxiVS1ORF44820P | |
| 44830 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 31980 | 93 aa hypothetical protein | |||
| 31990 | R | Vch216MrrP (100% identity) | SxiVS1MrrP | |
| 32000 | protein McrC | |||
| 31990 | restriction endonuclease | |||
| 32000 | R | VchSXTMcrCP (100% identity) | SxiVS1McrCP | |
| 32010 | R | VchSXTMcrBP (100% identity) | SxiVS1McrBP | |
| 32020 | DEAD/DEAH box helicase | |||
| 39870 | LysR family transcriptional regulator | |||
| 39880 | R | Sxi6452ORF1715P (100% identity) | SxiVS1ORF39880P | |
| 39890 | cell division protein Fic | |||