Flavobacterium columnare AL-02-36 |
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Putative Flavobacterium columnare AL-02-36 RM systems
Ref: Waldbieser,G.C. et al. unpublished
REBASE ref # 32744
Complete sequence: 3,401,257 bp
GenBank #: CP067379
REBASE acronym: Fco0236
Org_num: 50781
All begin JJC04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3815 | 129 aa hypothetical protein | |||
| 3820 | S | S.Fco0236ORF3810P (100% identity) | S.Fco0236ORF3820P | |
| 3825 | TCR/Tet family MFS transporter | |||
| 14780 | excinuclease ABC subunit UvrA | |||
| 14785 | R | Fco81ORF4045P (98% identity) | Fco0236ORF14810P | |
| 14790 | 105 aa hypothetical protein | |||
| 14795 | 110 aa hypothetical protein | |||
| 14800 | S | S.BneMS4ORFKP (43% identity) | S.Fco0236ORF14810P | |
| 14805 | virulence RhuM family protein | |||
| 14810 | M | M.Fco81ORF4045P (95% identity) | M.Fco0236ORF14810P | |
| 14820 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | |||
| 14965 | 282 aa hypothetical protein | |||
| ??? | R | Cta4753ORF6710P (87% identity) | Fco0236ORF15015P | |
| 14985 | 71 aa hypothetical protein | |||
| 14990 | AAA family ATPase | |||
| 14995 | S | S.Gli15749III (32% identity) | S2.Fco0236ORF15015P | |
| 15000 | S | S.MspBLZ2ORFGP (11% identity) | S1.Fco0236ORF15015P | |
| 15005 | 407 aa hypothetical protein | |||
| 15010 | 71 aa hypothetical protein | |||
| 15015 | M | M.Cta4753ORF6710P (90% identity) | M.Fco0236ORF15015P | |
| 15020 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3805 | 2-oxoglutarate dehydrogenase complex | |||
| ??? | RM | CcaI1ORFGP (53% identity) | Fco0236ORF3810P | |
| 3820 | S | S.Fco0236ORF3820P (100% identity) | S.Fco0236ORF3810P | |
| 3825 | TCR/Tet family MFS transporter | |||
| 9770 | thiamine diphosphokinase | |||
| 9775 | R | FcoC2ORF1470P (90% identity) | Fco0236ORF9780P | |
| 9780 | M | M.FcoC2ORF1470P (92% identity) | M.Fco0236ORF9780P | |
| 9785 | NADP-dependent isocitrate dehydrogenase | |||
| 9815 | helix-turn-helix transcriptional regulator | |||
| ??? | R | FcoFCOF9ORF5870P (89% identity) | Fco0236ORF9830P | |
| 9830 | M | M.FcoFCOF9ORF5870P (81% identity) | M.Fco0236ORF9830P | |
| 9835 | 155 aa hypothetical protein | |||
| 10695 | 122 aa hypothetical protein | |||
| 10700 | M | M.FcoC2ORF790P (97% identity) | M.Fco0236ORF10700P | |
| ??? | R | Fco81ORF7780P (99% identity) | Fco0236ORF10700P | |
| 10715 | 296 aa hypothetical protein | |||
| 10720 | FRG domain-containing protein | |||
| ??? | R | AspG270ORFFP (92% identity) | Fco0236ORF10730P | |
| 10730 | M | M.AspG270ORFFP (97% identity) | M.Fco0236ORF10730P | |
| 10735 | 69 aa hypothetical protein | |||
| 12205 | 187 aa hypothetical protein | |||
| 12210 | M | M2.Fsp34774ORFFP (86% identity) | M1.Fco0236ORF12210P | |
| 12215 | M | M1.Fsp34774ORFFP (87% identity) | M2.Fco0236ORF12210P | |
| 12220 | MFS transporter | |||
| 13750 | LPS export ABC transporter periplasmic protein | |||
| 13755 | R | FcoC2ORF11705P (98% identity) | Fco0236ORF13760P | |
| 13760 | M | M.Fco81ORF5010P (99% identity) | M.Fco0236ORF13760P | |
| 13765 | iron-sulfur cluster repair di-iron protein | |||
| 14415 | ATP-dependent endonuclease | |||
| 14420 | M | M.FcoC2ORF12300P (97% identity) | M.Fco0236ORF14420P | |
| 14425 | RM | DspN47ORF42200P (81% identity) | Fco0236ORF14420P | |
| 14430 | helix-turn-helix transcriptional regulator | |||
| 15410 | helix-turn-helix transcriptional regulator | |||
| ??? | M | M.Fsp7ORF8560P (83% identity) | M.Fco0236ORF15415P | |
| 15425 | R | Fsp7ORF8560P (29% identity) | Fco0236ORF15415AP | |
| 15430 | R | Fsp7ORF8560P (58% identity) | Fco0236ORF15415BP | |
| 15435 | 115 aa hypothetical protein | |||
| 16520 | methylmalonyl-CoA mutase | |||
| 16525 | C | C.FcoFC4ORF11145P (80% identity) | C.Fco0236ORF16550P | |
| 16530 | 80 aa hypothetical protein | |||
| 16535 | R | Fsp34775ORFEP (43% identity) | Fco0236ORF16550P | |
| 16540 | 189 aa hypothetical protein | |||
| 16545 | 340 aa hypothetical protein | |||
| 16550 | M | M.Ftr60100ORF6395P (79% identity) | M.Fco0236ORF16550P | |
| 16555 | 207 aa hypothetical protein | |||