Flavobacterium columnare Costa Rica 04-02-TN |
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Putative Flavobacterium columnare Costa Rica 04-02-TN RM systems
Ref: Waldbieser,G.C. et al. unpublished
REBASE ref # 32744
Complete sequence: 3,540,003 bp
GenBank #: CP067377
REBASE acronym: Fco02TN
Org_num: 50782
All begin JJC03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14045 | 293 aa hypothetical protein | |||
| 14050 | S | S.Fbr15ORF820P (51% identity) | S.Fco02TNORF14055P | |
| 14055 | M | M.Sgr2844ORFOP (78% identity) | M.Fco02TNORF14055P | |
| 14060 | helix-turn-helix transcriptional regulator | |||
| 14395 | 232 aa hypothetical protein | |||
| 14400 | R | Fgy17688ORFAP (88% identity) | Fco02TNORF14405P | |
| 14405 | M | M.Fgy17688ORFAP (87% identity) | M.Fco02TNORF14405P | |
| 14410 | S | S.Vvu61306I (21% identity) | S1.Fco02TNORF14405P | |
| 14415 | S | S.Van286ORF15710P (10% identity) | S2.Fco02TNORF14405P | |
| 14420 | S | S.Cba1863ORF22980P (26% identity) | S3.Fco02TNORF14405P | |
| 14425 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6680 | DUF4062 domain-containing protein | |||
| ??? | R | Fco23463ORF5590P (64% identity) | Fco02TNORF6690P | |
| 6690 | M | M.FcoC2ORF790P (91% identity) | M.Fco02TNORF6690P | |
| 6695 | leucine-rich repeat protein | |||
| 11945 | ATP-binding protein | |||
| 11950 | M | M.FcoPf1ORF212P (76% identity) | M.Fco02TNORF11950P | |
| 11955 | DNA cytosine methyltransferase | |||
| 13515 | transposase | |||
| 13520 | R | Fla15035ORF2340P (73% identity) | Fco02TNORF13525P | |
| 13525 | M | M.CloLW9ORF3192P (83% identity) | M.Fco02TNORF13525P | |
| 13530 | DUF2345 domain-containing protein | |||