Fusobacterium nucleatum subsp. polymorphum THCT15E1 |
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Putative Fusobacterium nucleatum subsp. polymorphum THCT15E1 RM systems
Ref: Bi,D. et al. unpublished
REBASE ref # 32754
Complete sequence: 2,515,213 bp
GenBank #: CP071094
REBASE acronym: Fnu15E1
Org_num: 50806
All begin JY397_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5295 | flotillin | |||
| 5300 | R | FnuM3210IIP (100% identity) | GAYNNNNNGTNG | Fnu15E1ORF5315P |
| 5305 | S | S.Fnu028I (98% identity) | GAYNNNNNGTNG | S.Fnu15E1ORF5315P |
| 5310 | DNA binding domain-containing protein | |||
| 5315 | M | M.FnuSB6ORF1565P (100% identity) | GAYNNNNNGTNG | M.Fnu15E1ORF5315P |
| 5320 | 116 aa hypothetical protein | |||
| 7425 | metal ABC transporter permease | |||
| 7430 | M | M.FnuM3210I (100% identity) | M.Fnu15E1ORF7430P | |
| 7435 | S | S1.FnuN7B5I (86% identity) | S1.Fnu15E1ORF7430P | |
| 7440 | S | S2.Fnu2500VIP (98% identity) | S2.Fnu15E1ORF7430P | |
| 7445 | S | S3.FnuM3210IP (100% identity) | S3.Fnu15E1ORF7430P | |
| 7450 | tyrosine-type recombinase/integrase | |||
| 7455 | R | Fnu1267IIIP (98% identity) | Fnu15E1ORF7430P | |
| 7460 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4185 | ArsB/NhaD family transporter | |||
| 4190 | M | M.FnuSB6I (100% identity) | GCATC | M.Fnu15E1ORF4190P |
| 4195 | biotin--[acetyl-CoA-carboxylase] ligase | |||
| 5410 | IS200/IS605 family transposase | |||
| 5415 | M | M.FnuSB6ORF2415P (97% identity) | M.Fnu15E1ORF5415P | |
| 5420 | SWIM zinc finger family protein | |||
| 8310 | DNA binding domain-containing protein | |||
| 8315 | RM | FnuM3127ORF4355P (95% identity) | Fnu15E1ORF8315P | |
| 8320 | AAA family ATPase | |||
| 11250 | 75 aa hypothetical protein | |||
| 11255 | M | M.FnuCJ007ORF8830P (89% identity) | M.Fnu15E1ORF11255P | |
| 11260 | 217 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 310 | MFS transporter | |||
| 315 | R | Fnu028McrCP (100% identity) | Fnu15E1McrC2P | |
| 320 | R | Fnu028McrBP (100% identity) | Fnu15E1McrB2P | |
| 325 | IS1182 family transposase | |||
| 3880 | DEAD/DEAH box helicase | |||
| 3885 | R | FnuB18ORF1100P (100% identity) | Fnu15E1ORF3885P | |
| 3890 | RidA family protein | |||
| 4095 | 237 aa hypothetical protein | |||
| 4100 | R | Fnu047McrBP (100% identity) | Fnu15E1McrBP | |
| 4105 | R | Fnu047McrCP (100% identity) | Fnu15E1McrCP | |
| 4110 | ATP-dependent chaperone ClpB | |||