Escherichia coli CY598 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli CY598 RM systems
Ref: You,C. and Li,B. unpublished
REBASE ref # 32714
| Sequence length: | GenBank #: | |
| Chromosome: | 4,688,863 bp | CP068283 |
| plasmid pCY598: | 67,408 bp | CP068284 |
REBASE acronym: EcoCY598
Org_num: 50609
All begin JI738_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22455 | endoribonuclease SymE | |||
| 22460 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoCY598ORF22465P |
| 22465 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoCY598ORF22465P |
| 22470 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoCY598ORF22465P |
| 22475 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10520 | drug/metabolite exporter YedA | |||
| 10525 | V | V.SflFF64DcmP (100% identity) | V.EcoCY598DcmP | |
| 10530 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCY598DcmP |
| 10535 | phosphohydrolase | |||
| 16980 | DNA-binding transcriptional regulator Fis | |||
| 16985 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoCY598ORF16985P |
| 16990 | DUF2556 family protein | |||
| 17605 | ribulose-phosphate 3-epimerase | |||
| 17610 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCY598DamP |
| 17615 | cell division protein DamX | |||
| plasmid pCY598 | ||||
| 23125 | 73 aa hypothetical protein | |||
| 23130 | M | M.SflN92ORF24820P (100% identity) | M.EcoCY598ORF23130P | |
| 23135 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6135 | site-specific DNA recombinase | |||
| 6140 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoCY598ORF6140P |
| 6145 | isocitrate dehydrogenase | |||
| 22440 | 906 aa hypothetical protein | |||
| 22445 | R | SenHNK130McrCP (100% identity) | EcoCY598McrCP | |
| 22450 | R | SenHNK130McrBP (100% identity) | EcoCY598McrBP | |
| 22455 | endoribonuclease SymE | |||
| 22470 | type I restriction-modification system | |||
| 22475 | R | SenHNK130MrrP (100% identity) | EcoCY598Mrr2P | |
| 22480 | GTPase | |||