Escherichia coli CY706 |
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Putative Escherichia coli CY706 RM systems
Ref: You,C. and Li,B. unpublished
REBASE ref # 32714
| Sequence length: | GenBank #: | |
| Chromosome: | 4,669,770 bp | CP068281 |
| plasmid pCY706: | 67,545 bp | CP068282 |
REBASE acronym: EcoCY706
Org_num: 50610
All begin JJW04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5415 | endoribonuclease SymE | |||
| 5420 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoCY706ORF5425P |
| 5425 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoCY706ORF5425P |
| 5430 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoCY706ORF5425P |
| 5435 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 565 | ribulose-phosphate 3-epimerase | |||
| 570 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCY706DamP |
| 575 | cell division protein DamX | |||
| 16090 | drug/metabolite exporter YedA | |||
| 16095 | V | V.SflFF64DcmP (100% identity) | V.EcoCY706DcmP | |
| 16100 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCY706DcmP |
| 16105 | phosphohydrolase | |||
| 22550 | DNA-binding transcriptional regulator Fis | |||
| 22555 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoCY706ORF22555P |
| 22560 | DUF2556 family protein | |||
| plasmid pCY706 | ||||
| 22935 | 101 aa hypothetical protein | |||
| 22940 | M | M.SflN92ORF24820P (100% identity) | M.EcoCY706ORF22940P | |
| 22945 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5400 | 906 aa hypothetical protein | |||
| 5405 | R | SenHNK130McrCP (100% identity) | EcoCY706McrCP | |
| 5410 | R | SenHNK130McrBP (100% identity) | EcoCY706McrBP | |
| 5415 | endoribonuclease SymE | |||
| 5430 | type I restriction-modification system | |||
| 5435 | R | SenHNK130MrrP (100% identity) | EcoCY706MrrP | |
| 5440 | GTPase | |||
| 11845 | site-specific DNA recombinase | |||
| 11850 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoCY706ORF11850P |
| 11855 | isocitrate dehydrogenase | |||