Escherichia coli CY708 |
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Putative Escherichia coli CY708 RM systems
Ref: You,C. and Li,B. unpublished
REBASE ref # 32714
| Sequence length: | GenBank #: | |
| Chromosome: | 4,625,856 bp | CP068279 |
| plasmid pCY708: | 67,545 bp | CP068280 |
REBASE acronym: EcoCY708
Org_num: 50611
All begin JJW05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5150 | endoribonuclease SymE | |||
| 5155 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoCY708ORF5160P |
| 5160 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoCY708ORF5160P |
| 5165 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoCY708ORF5160P |
| 5170 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | cell division protein DamX | |||
| 1630 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCY708DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 15575 | drug/metabolite exporter YedA | |||
| 15580 | V | V.SflFF64DcmP (100% identity) | V.EcoCY708DcmP | |
| 15585 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCY708DcmP |
| 15590 | phosphohydrolase | |||
| 22035 | DNA-binding transcriptional regulator Fis | |||
| 22040 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoCY708ORF22040P |
| 22045 | DUF2556 family protein | |||
| plasmid pCY708 | ||||
| 22680 | 101 aa hypothetical protein | |||
| 22685 | M | M.SflN92ORF24820P (100% identity) | M.EcoCY708ORF22685P | |
| 22690 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5135 | 906 aa hypothetical protein | |||
| 5140 | R | SenHNK130McrCP (100% identity) | EcoCY708McrCP | |
| 5145 | R | SenHNK130McrBP (100% identity) | EcoCY708McrBP | |
| 5150 | endoribonuclease SymE | |||
| 5165 | type I restriction-modification system | |||
| 5170 | R | SenHNK130MrrP (100% identity) | EcoCY708MrrP | |
| 5175 | GTPase | |||
| 11580 | site-specific DNA recombinase | |||
| 11585 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoCY708ORF11585P |
| 11590 | isocitrate dehydrogenase | |||