Iamia species SCSIO 61187 |
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Putative Iamia species SCSIO 61187 RM systems
Ref: He,Y. unpublished
REBASE ref # 29733
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,143 bp | CP050948 |
| plasmid unnamed2: | 34,219 bp | CP050950 |
REBASE acronym: Isp61187
Org_num: 50853
All begin HC251_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 535 | 128 aa hypothetical protein | |||
| 540 | M | M.AspG12BORFAP (69% identity) | M.Isp61187ORF540P | |
| 545 | S | S.Cva14ORF18830P (34% identity) | S.Isp61187ORF540P | |
| 550 | R | AspG12BORFAP (66% identity) | Isp61187ORF540P | |
| 555 | DUF91 domain-containing protein | |||
| 14075 | GIY-YIG nuclease family protein | |||
| 14080 | M | M.Mpa17ORFDP (39% identity) | M.Isp61187ORF14080AP | |
| 14085 | IS3 family transposase | |||
| 14090 | IS30 family transposase | |||
| 14095 | M | M.Mpa17ORFDP (38% identity) | M.Isp61187ORF14080BP | |
| 14100 | S | S.Ssu504ORF6005P (30% identity) | S.Isp61187ORF14080P | |
| 14105 | R | Mpa17ORFDP (71% identity) | Isp61187ORF14080P | |
| 14110 | helix-turn-helix transcriptional regulator | |||
| 15975 | 117 aa hypothetical protein | |||
| 15980 | R | HspSP31ORF8045P (33% identity) | Isp61187ORF15995P | |
| 15985 | 308 aa hypothetical protein | |||
| 15990 | HNH endonuclease | |||
| 15995 | M | M.Csp1020ORF1760P (43% identity) | M.Isp61187ORF15995P | |
| 16000 | 228 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4715 | DNA-binding protein | |||
| 4720 | R | Pga1313ORF18370P (50% identity) | Isp61187ORF4725P | |
| 4725 | M | M.Spu21405ORFDP (36% identity) | M1.Isp61187ORF4725P | |
| 4730 | M | M.PbaEnr10ORF53960P (28% identity) | M2.Isp61187ORF4725P | |
| 4735 | 246 aa hypothetical protein | |||
| 12960 | 281 aa hypothetical protein | |||
| 12965 | V | V.AspKera3ORF14435P (70% identity) | V.Isp61187ORF12970P | |
| 12970 | M | M.AspKera3ORF14435P (92% identity) | M.Isp61187ORF12970P | |
| 12975 | relaxase domain-containing protein | |||
| 16235 | glycerophosphodiester phosphodiesterase | |||
| 16240 | M | M.Ima19957ORF15030P (53% identity) | M.Isp61187ORF16240P | |
| 16245 | 430 aa hypothetical protein | |||
| 24160 | TM0106 family RecB-like putative nuclease | |||
| 24165 | R | Yal159ORF5035P (22% identity) | Isp61187ORF24165P | |
| plasmid unnamed2 | ||||
| 25155 | transposase | |||
| 25160 | M | M.SspJB150ORF18965P (62% identity) | M.Isp61187ORF25160P | |
| 25165 | R | WspD3ORFAP (26% identity) | Isp61187ORF25160P | |
| 25170 | class I SAM-dependent methyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12880 | metalloregulator ArsR/SmtB family transcription | |||
| 12885 | R | TspC0L2ORF4680P (64% identity) | Isp61187ORF12885P | |
| 12890 | helix-turn-helix domain-containing protein | |||