Escherichia coli O141:H4 P13-6 |
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Putative Escherichia coli O141:H4 P13-6 RM systems
Ref: Perrat,A. et al. unpublished
REBASE ref # 32730
| Sequence length: | GenBank #: | |
| Chromosome: | 4,963,420 bp | CP080223 |
| plasmid pP136-1: | 226,437 bp | CP080224 |
| plasmid pP136-2: | 103,673 bp | CP080225 |
| plasmid pP136-3: | 82,610 bp | CP080226 |
| plasmid pP136-6: | 74,646 bp | CP080229 |
| plasmid pP136-7: | 48,077 bp | CP080230 |
REBASE acronym: EcoP136
Org_num: 50706
All begin KZW89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21085 | adenine/cytosine-specific restriction | |||
| 21090 | R | Ecos15955ORF12100P (100% identity) | EcoP136ORF21095P | |
| 21095 | M | M.Ecos15955ORF12100P (100% identity) | M.EcoP136ORF21095P | |
| 21100 | S | S.Ecos15955ORF12100P (100% identity) | S.EcoP136ORF21095P | |
| 21105 | multidrug efflux MFS transporter MdtM | |||
| plasmid pP136-6 | ||||
| 28140 | 3-phosphatase | |||
| 28145 | R | EcoC1730ORF25345P (100% identity) | EcoP136ORF28155P | |
| 28150 | S | S.EcoC1730ORF25345P (100% identity) | S.EcoP136ORF28155P | |
| 28155 | M | M.EcoC1730ORF25345P (100% identity) | M.EcoP136ORF28155P | |
| 28160 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1560 | cell division protein DamX | |||
| 1565 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoP136DamP |
| 1570 | ribulose-phosphate 3-epimerase | |||
| 2185 | DUF2556 family protein | |||
| 2190 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoP136ORF2190P |
| 2195 | DNA-binding transcriptional regulator Fis | |||
| 5565 | PerC family transcriptional regulator | |||
| 5570 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoP136ORF5570P |
| 5575 | LexA family transcriptional regulator | |||
| 5615 | 257 aa hypothetical protein | |||
| 5620 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoP136ORF5620P | |
| 5625 | R | Sso8033ORF3755P (100% identity) | EcoP136ORF5620P | |
| 5630 | 121 aa hypothetical protein | |||
| 6205 | Com family DNA-binding transcriptional | |||
| 6210 | M | M.SenYU39ORF1896P (100% identity) | M.EcoP136ORF6210P | |
| 6215 | ribosome-associated translation inhibitor RaiA | |||
| 9520 | phosphohydrolase | |||
| 9525 | M | M.EcoEC521DcmP (100% identity) | CCWGG | M.EcoP136DcmP |
| 9530 | V | V.EcoEC521DcmP (100% identity) | V.EcoP136DcmP | |
| 9535 | drug/metabolite exporter YedA | |||
| 10090 | TrmB family transcriptional regulator | |||
| 10095 | M | M.Eco18ORF2364P (100% identity) | M.EcoP136ORF10095P | |
| 10110 | tellurite/colicin resistance protein | |||
| 13765 | Shiga toxin Stx2e subunit A | |||
| 13785 | M | M.Ecocq9ORF19465P (100% identity) | M.EcoP136ORF13785P | |
| 13790 | TrmB family transcriptional regulator | |||
| 14645 | tellurite/colicin resistance protein | |||
| 14660 | M | M.EcoSTEC383ORFDP (97% identity) | M.EcoP136ORF14660P | |
| 14665 | TrmB family transcriptional regulator | |||
| 20830 | LexA family transcriptional regulator | |||
| 20835 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoP136ORF20835P |
| 20840 | PerC family transcriptional regulator | |||
| plasmid pP136-1 | ||||
| 25300 | 55 aa hypothetical protein | |||
| 25305 | M | M.YpsF1ORFCP (100% identity) | M.EcoP136ORF25305P | |
| 25310 | thermonuclease family protein | |||
| 25705 | DNA-binding protein | |||
| 25710 | M | M.YpsF1ORFDP (100% identity) | M.EcoP136ORF25710P | |
| 25715 | 284 aa hypothetical protein | |||
| plasmid pP136-2 | ||||
| 25990 | 106 aa hypothetical protein | |||
| 25995 | M | M.SspPIBORF23080P (100% identity) | M.EcoP136ORF25995P | |
| 26000 | 73 aa hypothetical protein | |||
| plasmid pP136-3 | ||||
| 26495 | 101 aa hypothetical protein | |||
| 26500 | M | M.SflFF87ORF23240P (100% identity) | M.EcoP136ORF26500P | |
| 26505 | 73 aa hypothetical protein | |||
| plasmid pP136-6 | ||||
| 28020 | 121 aa hypothetical protein | |||
| 28025 | M | M.EcoE1728ORF24505P (55% identity) | M.EcoP136ORF28025P | |
| 28030 | 85 aa hypothetical protein | |||
| plasmid pP136-7 | ||||
| 28425 | 89 aa hypothetical protein | |||
| 28430 | M | M.Eco13463ORF5259P (100% identity) | M.EcoP136ORF28430P | |
| 28440 | 92 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21080 | GTPase | |||
| 21085 | R | Eco2185MrrP (100% identity) | EcoP136MrrP | |
| 21090 | type I restriction-modification system | |||