Escherichia species TM-G17TGC |
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Putative Escherichia species TM-G17TGC RM systems
Ref: Yu,R. and Du,X. unpublished
REBASE ref # 32441
| Sequence length: | GenBank #: | |
| Chromosome: | 4,583,314 bp | CP080247 |
| plasmid pTM-G17: | 93,013 bp | CP080248 |
REBASE acronym: Esp17TGC
Org_num: 50773
All begin KY274_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18915 | adenine/cytosine-specific restriction | |||
| 18920 | R | EcosDH5aORF5700P (100% identity) | AACNNNNNNGTGC | Esp17TGCORF18925P |
| 18925 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Esp17TGCORF18925P |
| 18930 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Esp17TGCORF18925P |
| 18935 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | cell division protein DamX | |||
| 1655 | M | M.UbaC1152DamP (100% identity) | GATC | M.Esp17TGCDamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Esp17TGCORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 8755 | phosphohydrolase | |||
| 8760 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Esp17TGCDcmP |
| 8765 | V | V.SflFF64DcmP (100% identity) | V.Esp17TGCDcmP | |
| 8770 | drug/metabolite exporter YedA | |||
| 12720 | DUF1317 domain-containing protein | |||
| 12725 | M | M.SenHNK130ORF1185P (100% identity) | M.Esp17TGCORF12725P | |
| 12730 | DUF4060 family protein | |||
| plasmid pTM-G17 | ||||
| 22680 | EAL domain-containing protein | |||
| 22685 | R | YpsR1ORFAP (100% identity) | CCWGG | Esp17TGCORF22690P |
| 22690 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Esp17TGCORF22690P |
| 22695 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13260 | NADP-dependent isocitrate dehydrogenase | |||
| 13265 | R | SsoSE61ORF22640P (100% identity) | YCGR | Esp17TGCORF13265P |
| 13270 | site-specific DNA recombinase | |||
| 18910 | GTPase | |||
| 18915 | R | SenHNK130MrrP (100% identity) | Esp17TGCMrrP | |
| 18920 | type I restriction-modification system | |||
| 18935 | endoribonuclease SymE | |||
| 18940 | R | SenHNK130McrBP (100% identity) | Esp17TGCMcrBP | |
| 18945 | R | SenHNK130McrCP (100% identity) | Esp17TGCMcrCP | |
| 18950 | 978 aa hypothetical protein | |||