Escherichia coli PC6 |
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Putative Escherichia coli PC6 RM systems
Ref: Zheng,X. unpublished
REBASE ref # 29240
| Sequence length: | GenBank #: | |
| Chromosome: | 4,828,523 bp | CP080253 |
| plasmid pPC6-mcr1: | 101,399 bp | CP080254 |
REBASE acronym: EcoPC6
Org_num: 50713
All begin KZX77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14065 | transcription factor | |||
| 14070 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoPC6ORF14070P |
| 14075 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.EcoPC6ORF14070P |
| 14080 | DUF4433 domain-containing protein | |||
| 14085 | macro domain-containing protein | |||
| 14090 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | EcoPC6ORF14070P |
| 14095 | M48 family metallopeptidase | |||
| plasmid pPC6-mcr1 | ||||
| 23790 | 3-phosphatase | |||
| 23795 | R | KpnLL83ORF1P (100% identity) | EcoPC6ORF23805P | |
| 23800 | S | S.SspS13ORF175P (100% identity) | S.EcoPC6ORF23805P | |
| 23805 | M | M.SspS13ORF175P (100% identity) | M.EcoPC6ORF23805P | |
| 23810 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | cell division protein DamX | |||
| 1630 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPC6DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoPC6ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 5695 | Com family DNA-binding transcriptional | |||
| 5700 | M | M.SenYU39ORF1896P (100% identity) | M.EcoPC6ORF5700P | |
| 5705 | ribosome-associated translation inhibitor RaiA | |||
| 6995 | recombination protein NinB | |||
| 7000 | M | M.SflWW1ORF7070P (99% identity) | GATC | M.EcoPC6ORF7000P |
| 7005 | NinE family protein | |||
| 9180 | phosphohydrolase | |||
| 9185 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoPC6DcmP |
| 9190 | V | V.SsoSE61DcmP (100% identity) | V.EcoPC6DcmP | |
| 9195 | drug/metabolite exporter YedA | |||
| 10785 | 56 aa hypothetical protein | |||
| 10790 | M | M.Eco99CORF23380P (99% identity) | M.EcoPC6ORF10790P | |
| 10795 | thermonuclease family protein | |||
| plasmid pPC6-mcr1 | ||||
| 23675 | recombination-associated protein RdgC | |||
| 23680 | M | M.KpnLL83ORF28P (100% identity) | M.EcoPC6ORF23680P | |
| 23695 | tellurite/colicin resistance protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20145 | 100 aa hypothetical protein | |||
| 20150 | R | SflN116ORF19490P (99% identity) | GAACC | EcoPC6ORF20155P |
| 20155 | M | M.Eco812A1ORF17660P (100% identity) | GAACC | M.EcoPC6ORF20155P |
| 20160 | DEAD/DEAH box helicase family protein | |||