Escherichia coli PK8568 |
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Putative Escherichia coli PK8568 RM systems
Ref: Mohsin,M. et al. unpublished
REBASE ref # 31850
| Sequence length: | GenBank #: | |
| Chromosome: | 4,694,352 bp | CP080126 |
| plasmid pPK8568-122kb: | 122,366 bp | CP080128 |
| plasmid pPK8568-156kb: | 156,326 bp | CP080127 |
| plasmid pPK8568-tetX: | 91,844 bp | CP080129 |
REBASE acronym: Eco8568
Org_num: 50722
All begin KZY03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19635 | SAM-dependent DNA methyltransferase | |||
| 19640 | S | S.EcoC0002ORF11690P (99% identity) | S.Eco8568ORF19640P | |
| 19645 | DEAD/DEAH box helicase family protein | |||
| plasmid pPK8568-122kb | ||||
| 23865 | 3-phosphatase | |||
| 23870 | R | EcoZ1002ORF26975P (100% identity) | Eco8568ORF23880P | |
| 23875 | S | S.EcoNEC5ORF6225P (100% identity) | S.Eco8568ORF23880P | |
| 23880 | M | M.EcoZ1002ORF26975P (100% identity) | M.Eco8568ORF23880P | |
| 23885 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco8568DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco8568ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 8755 | phosphohydrolase | |||
| 8760 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco8568DcmP |
| 8765 | V | V.SflFF59DcmP (100% identity) | V.Eco8568DcmP | |
| 8770 | drug/metabolite exporter YedA | |||
| 14920 | replication endonuclease | |||
| 14925 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco8568ORF14925P |
| 14930 | TraR/DksA family transcriptional regulator | |||
| plasmid pPK8568-156kb | ||||
| 22840 | BREX-1 system phosphatase PglZ type A | |||
| 22845 | RM | Eco297ORF24165P (100% identity) | Eco8568ORF22845P | |
| 22850 | DUF262 domain-containing protein | |||
| plasmid pPK8568-tetX | ||||
| 24260 | 102 aa hypothetical protein | |||
| 24265 | M | M.SenST46ORF25580P (100% identity) | M.Eco8568ORF24265P | |
| 24270 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPK8568-tetX | ||||
| 24165 | 67 aa hypothetical protein | |||
| 24170 | M | M.SspS13ORF650P (100% identity) | M.Eco8568ORF24170P | |
| 24175 | R | SspS13ORF650P (100% identity) | Eco8568ORF24170P | |
| 24180 | tRNA modification GTPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13150 | NADP-dependent isocitrate dehydrogenase | |||
| 13155 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco8568ORF13155P |
| 13160 | site-specific DNA recombinase | |||