|
Putative Thiothrix lacustris DSM 21227 RM systems
Ref: Kyrpides,N. et al. unpublished
REBASE ref # 18814
Contig set: 3,713,849 bp
GenBank #: JHYQ00000000 (NZ_JHYQ00000000)
REBASE acronym: Tla21227
Org_num: 50051
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2 | prepilin-type N-terminal cleavage/methylation domain-containing protein | |||
5 | R | TspASORF5175P (96% identity) | Tla21227ORFBP | |
12 | 68 aa hypothetical protein | |||
2 | DUF1016 domain-containing protein | |||
4 | S | S.PspKAN5ORF2980P (40% identity) | S.Tla21227ORFDP | |
5 | 101 aa hypothetical protein | |||
6 | M | M.TspASORF5175P (98% identity) | M.Tla21227ORFDP | |
12 | COG2907: Amine oxidase, flavin-containing | |||
6 | 94 aa hypothetical protein | |||
7 | R | TspA52ORF4460P (96% identity) | Tla21227ORFLP | |
9 | type II toxin-antitoxin system death-on-curing family toxin | |||
10 | DNA-binding protein | |||
11 | S | S.Ssp4073ORF40580P (52% identity) | S.Tla21227ORFLP | |
13 | M | M.TspA52ORF4460P (89% identity) | M.Tla21227ORFLP | |
16 | 81 aa hypothetical protein | |||
6 | 288 aa hypothetical protein PFWH6_3658 | |||
7 | R | TlaMK1ORF16605P (96% identity) | Tla21227ORFEP | |
11 | 59 aa hypothetical protein | |||
12 | type II toxin-antitoxin system Phd/YefM family antitoxin | |||
13 | 61 aa hypothetical protein | |||
14 | S | S.Mso21ORFGP (62% identity) | S.Tla21227ORFEP | |
15 | DUF1016 family protein | |||
16 | 92 aa hypothetical protein | |||
17 | M | M.TlaMK1ORF16605P (98% identity) | M.Tla21227ORFEP | |
19 | C4-dicarboxylate transporter/malic acid transport protein | |||
86 | PAS domain S-box protein | |||
88 | R | TlaMK1ORF8010P (99% identity) | TTAGNNNNNTCC | Tla21227ORFGP |
91 | 95 aa hypothetical protein | |||
92 | DUF559 domain-containing protein | |||
93 | 129 aa hypothetical protein | |||
94 | 79 aa hypothetical protein | |||
95 | HNH endonuclease | |||
96 | LOW QUALITY PROTEIN: hypothetical protein Thini_1483 | |||
97 | S | S.Tfr49748I (97% identity) | TTAGNNNNNTCC | S.Tla21227ORFGP |
98 | M | M.TlaMK1ORF8010P (92% identity) | TTAGNNNNNTCC | M.Tla21227ORFGP |
101 | 72 aa hypothetical protein | |||
293 | ATP-binding protein | |||
297 | S | S.CspP13ORF5605P (38% identity) | S.Tla21227ORFNP | |
299 | 71 aa hypothetical protein | |||
300 | M | M.TspASORF2890P (99% identity) | M.Tla21227ORFNP | |
303 | R | TspQ5ORF1010P (89% identity) | Tla21227ORFNP | |
309 | ATP-binding cassette domain-containing protein | |||
284 | peptidase M38 | |||
285 | R | TspASORF18315P (98% identity) | Tla21227ORFOP | |
291 | Fic family protein | |||
292 | 102 aa hypothetical protein | |||
293 | 74 aa hypothetical protein | |||
294 | DUF2559 family protein | |||
295 | 97 aa hypothetical protein | |||
296 | adenosine monophosphate-protein transferase Fic | |||
296 | 59 aa hypothetical protein | |||
297 | adenosine monophosphate-protein transferase Fic | |||
299 | M | M.TspASORF18315P (96% identity) | M.Tla21227ORFOP | |
301 | Uma2 family endonuclease | |||
302 | 109 aa hypothetical protein | |||
303 | 72 aa hypothetical protein | |||
304 | 81 aa hypothetical protein | |||
305 | 74 aa hypothetical protein | |||
306 | 83 aa hypothetical protein | |||
307 | PIN domain-containing protein | |||
308 | 74 aa hypothetical protein | |||
309 | 75 aa hypothetical protein | |||
310 | S | S.MmaA45ORFAP (29% identity) | S.Tla21227ORFOP | |
312 | 234 aa hypothetical protein BWK73_36150 | |||
428 | 182 aa hypothetical protein | |||
429 | M | M.TlaMK1ORF1515P (99% identity) | M.Tla21227ORFQP | |
431 | 122 aa hypothetical protein | |||
432 | 64 aa hypothetical protein | |||
433 | 61 aa hypothetical protein | |||
436 | S | S2.TlaMK1ORF1515P (45% identity) | S.Tla21227ORFQP | |
437 | 163 aa hypothetical protein BWK73_52980 | |||
438 | 64 aa hypothetical protein | |||
439 | prevent-host-death family protein | |||
440 | 82 aa hypothetical protein | |||
441 | R | TlaMK1ORF1515P (98% identity) | Tla21227ORFQP | |
445 | 122 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
8 | 5'-3' exonuclease | |||
9 | RM | TlaWSORF13805P (84% identity) | Tla21227ORFKP | |
14 | type II toxin-antitoxin system VapB family antitoxin | |||
27 | DNA binding domain-containing protein | |||
28 | RM | TlaMK1ORF7705P (76% identity) | Tla21227ORFPP | |
30 | 191 aa hypothetical protein A2514_02360 | |||
49 | AAA family ATPase | |||
51 | RM | TlaWSORF13640P (99% identity) | Tla21227ORFJP | |
54 | 91 aa hypothetical protein | |||
74 | ImmA/IrrE family metallo-endopeptidase | |||
75 | M | M.TlaWSORF19535P (98% identity) | M.Tla21227ORFIP | |
79 | S | S.TlaWSORF19535P (82% identity) | S.Tla21227ORFIP | |
80 | protein kinase | |||
90 | 61 aa hypothetical protein | |||
91 | R | TlaWSORF12005P (89% identity) | Tla21227ORFCP | |
92 | 148 aa hypothetical protein | |||
101 | quinolinate synthase NadA | |||
103 | M | M.TlaMK1ORF9770P (99% identity) | M.Tla21227ORFMP | |
104 | R | TlaMK1ORF9770P (100% identity) | Tla21227ORFMP | |
106 | DEAD/DEAH box helicase | |||
101 | toxin-antitoxin system toxin component, PIN family | |||
103 | RM | TsuDNT52ORF14380P (69% identity) | Tla21227ORFHP | |
108 | transposase | |||
120 | 64 aa hypothetical protein | |||
121 | M | M.TmoRTORF14260P (85% identity) | M.Tla21227ORFFP | |
123 | 151 aa hypothetical protein | |||
215 | 305 aa hypothetical protein BWK73_54015 | |||
217 | R | Tca21228ORF770P (96% identity) | Tla21227ORFAP | |
219 | 113 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
22 | transcriptional regulator | |||
23 | R | TspASMrrP (99% identity) | Tla21227MrrP | |
25 | 90 aa hypothetical protein |