Caulobacter vibrioides CB S2B lysogen |
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Putative Caulobacter vibrioides CB S2B lysogen RM systems
Ref: Ely,B. et al. unpublished
REBASE ref # 32657
Complete sequence: 4,060,222 bp
GenBank #: CP079926
REBASE acronym: CviS2B
Org_num: 50398
All begin KZH45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3200 | 660 aa hypothetical protein | |||
| 3205 | M | M.CviCB2AORF3325P (100% identity) | CGACNNNNNNNTRGG | M.CviS2BORF3205P |
| 3210 | S | S.CviCB2AORF3325P (100% identity) | CGACNNNNNNNTRGG | S.CviS2BORF3205P |
| 3215 | restriction endonuclease | |||
| 3220 | R | CviCB2AORF3325P (100% identity) | CGACNNNNNNNTRGG | CviS2BORF3205P |
| 3225 | IS3-like element ISCc3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1940 | A/G-specific adenine glycosylase | |||
| 1945 | M | M.CviCB1ORF1940P (100% identity) | GANTC | M.CviS2BORF1945P |
| 1950 | ribonuclease HII | |||
| 4305 | 173 aa hypothetical protein | |||
| 4310 | RM | CviCB2AORF4440P (100% identity) | CGACCAG | CviS2BORF4310P |
| 4315 | DUF1178 family protein | |||
| 5410 | 411 aa hypothetical protein | |||
| 5415 | M | M.CviCB2AORF5570P (100% identity) | YGCCGGCR | M.CviS2BORF5415P |
| 5420 | translation elongation factor 4 | |||
| 19170 | response regulator | |||
| 19175 | V | V.CviCB1ORF19455P (100% identity) | V.CviS2BORF19185P | |
| 19180 | cysteine synthase A | |||
| 19185 | M | M.CviCB1ORF19455P (100% identity) | GGCGCC | M.CviS2BORF19185P |
| 19190 | 144 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | restriction endonuclease subunit S | |||
| 3215 | R | CviCB2AMrrP (100% identity) | CviS2BMrrP | |
| 3220 | type I restriction endonuclease subunit R | |||