Escherichia coli E189 |
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Putative Escherichia coli E189 RM systems
Ref: Tamamura,Y. et al. unpublished
REBASE ref # 32717
| Sequence length: | GenBank #: | |
| Chromosome: | 4,982,641 bp | AP024521 |
| plasmid pE189-1: | 98,724 bp | AP024522 |
REBASE acronym: EcoE189
Org_num: 50653
All begin NIAHE189_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45800 | endoribonuclease SymE | |||
| 45810 | R | EcosEC9ORF12765P (100% identity) | GACNNNNNTRRG | EcoE189ORF45830P |
| 45820 | S | S.EcosEC9ORF12765P (100% identity) | GACNNNNNTRRG | S.EcoE189ORF45830P |
| 45830 | M | M.Esp9308ORFIP (100% identity) | GACNNNNNTRRG | M.EcoE189ORF45830P |
| 45840 | 388 aa hypothetical protein | |||
| plasmid pE189-1 | ||||
| 47280 | 73 aa hypothetical protein | |||
| 47290 | M | M.EcoE148ORF48340P (100% identity) | ACANNNNNNNTTAC | M.EcoE189ORF47290P |
| 47300 | S | S.EcoE148ORF48340P (100% identity) | ACANNNNNNNTTAC | S.EcoE189ORF47290P |
| 47310 | R | EcoE148ORF48340P (100% identity) | ACANNNNNNNTTAC | EcoE189ORF47290P |
| 47320 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3250 | 59 aa hypothetical protein | |||
| 3260 | M | M.Ecos67ORF8885P (100% identity) | M.EcoE189ORF3260P | |
| 3270 | R | Ecos67ORF8885P (100% identity) | EcoE189ORF3260P | |
| 3280 | 253 aa hypothetical protein | |||
| 8680 | 75 aa hypothetical protein | |||
| 8690 | M | M.EcoW113ORFIP (100% identity) | GATC | M.EcoE189ORF8690P |
| 8700 | replication endonuclease from | |||
| 19680 | inner membrane transporter YedA | |||
| 19690 | V | V.SsoSE61DcmP (100% identity) | V.EcoE189DcmP | |
| 19700 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoE189DcmP |
| 19710 | phosphohydrolase | |||
| 33510 | DNA-binding protein Fis | |||
| 33520 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoE189ORF33520P |
| 33530 | acrEF/envCD operon repressor | |||
| 34630 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE189DamP |
| 34650 | cell division protein DamX | |||
| 42480 | 57 aa hypothetical protein | |||
| 42490 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.EcoE189ORF42490P |
| 42500 | crossover junction endodeoxyribonuclease rusA | |||
| 42550 | 67 aa hypothetical protein | |||
| 42560 | M | M.SflLIN17ORF17405P (99% identity) | M.EcoE189ORF42560P | |
| 42570 | phage holin, lambda family protein | |||
| 45010 | surface composition regulator | |||
| 45020 | R | SflN107ORF20240P (100% identity) | EcoE189ORF45020P | |
| 45030 | conjugal transfer protein TraG | |||
| 45460 | 332 aa hypothetical protein | |||
| 45470 | R | EcosEC9ORF12570P (100% identity) | EcoE189ORF45470P | |
| 45480 | 9-O-acetyl-N-acetylneuraminic acid | |||
| plasmid pE189-1 | ||||
| 46530 | 311 aa hypothetical protein | |||
| 46540 | M | M.EcoE148ORF47580P (100% identity) | M.EcoE189ORF46540P | |
| 46550 | recombination-associated protein RdgC | |||