Rhodococcus hoagii JID03-46 |
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Putative Rhodococcus hoagii JID03-46 RM systems
Ref: Suzuki,Y. et al. Int. J. Med. Microbiol. (2021) In press
REBASE ref # 32929
Complete sequence: 5,237,537 bp
GenBank #: AP024196
REBASE acronym: Rho346
Org_num: 51438
All begin RE0346_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1180 | 424 aa hypothetical protein | |||
| 1190 | M | M.RspW8901ORF815P (93% identity) | M.Rho346ORF1190P | |
| 1200 | S | S.NfaORF27610P (46% identity) | S.Rho346ORF1190P | |
| 1210 | 565 aa hypothetical protein | |||
| 1220 | 369 aa hypothetical protein | |||
| 1230 | 194 aa hypothetical protein | |||
| 1240 | 213 aa hypothetical protein | |||
| 1250 | 160 aa hypothetical protein | |||
| 1260 | 131 aa hypothetical protein | |||
| 1270 | 299 aa hypothetical protein | |||
| 1280 | 234 aa hypothetical protein | |||
| 1290 | R | Rsp185ORF18915P (87% identity) | Rho346ORF1190P | |
| 1300 | TIGR03086 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2840 | dTDP-glucose 4,6-dehydratase | |||
| 2850 | V | V.Rho952ORF9210P (100% identity) | V.Rho346ORF2860P | |
| 2860 | M | M.RhoU19ORF2820P (99% identity) | M.Rho346ORF2860P | |
| 2870 | transcriptional regulator, MarR family | |||
| 17750 | 600 aa hypothetical protein | |||
| 17760 | M | M2.Msp20985ORF28070P (51% identity) | M.Rho346ORF17760P | |
| 17770 | 187 aa hypothetical protein | |||
| 17770 | 187 aa hypothetical protein | |||
| 17780 | V | V.Nce30759ORF546P (60% identity) | V.Rho346ORF17790P | |
| 17790 | M | M.Nfu01801ORF52375P (60% identity) | M.Rho346ORF17790P | |
| 17800 | 217 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1200 | 394 aa hypothetical protein | |||
| 1210 | R | RspW8901McrBP (75% identity) | Rho346McrBP | |
| 1220 | R | RspW8901McrCP (79% identity) | Rho346McrCP | |
| 1230 | 194 aa hypothetical protein | |||