Helicobacter species NHP19-0012 |
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Putative Helicobacter species NHP19-0012 RM systems
Ref: Rimbara,E. and Suzuki,M. unpublished
REBASE ref # 32762
| Sequence length: | GenBank #: | |
| Chromosome: | 1,510,356 bp | AP024819 |
| plasmid pNHP190012_1: | 47,061 bp | AP024820 |
| plasmid pNHP190012_3: | 11,414 bp | AP024822 |
REBASE acronym: Hsp0012
Org_num: 50851
All begin NHP190012_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5020 | 109 aa hypothetical protein | |||
| 5030 | M | M.HheASB1ORF15560P (30% identity) | M.Hsp0012ORF5030P | |
| 5040 | S | S.Cco2909ORF924P (18% identity) | S1.Hsp0012ORF5030P | |
| 5050 | S | S.Cje65395ORF8165P (39% identity) | S2.Hsp0012ORF5030P | |
| ??? | R | Hsu4022ORF4640P (65% identity) | Hsp0012ORF5030P | |
| 5080 | 71 aa hypothetical protein | |||
| plasmid pNHP190012_1 | ||||
| 16230 | 66 aa hypothetical protein | |||
| ??? | R | HheASB1ORF5050P (80% identity) | Hsp0012ORF16280P | |
| 16260 | S | S.Hsu4022ORF4640P (43% identity) | S.Hsp0012ORF16280P | |
| 16270 | 170 aa hypothetical protein | |||
| 16280 | M | M.Zsp43204ORF8690P (41% identity) | M.Hsp0012ORF16280P | |
| 16290 | HicB-like domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5690 | 122 aa hypothetical protein | |||
| 5700 | RM | HbiCORF8670P (51% identity) | Hsp0012ORF5700P | |
| 5710 | ComB9 competence protein | |||
| 10540 | Molybdenum cofactor biosynthesis protein A MoaA | |||
| 10550 | M | M.Hsp0003ORF8710P (84% identity) | M.Hsp0012ORF10550P | |
| 10560 | 233 aa hypothetical protein | |||
| 10560 | 233 aa hypothetical protein | |||
| 10570 | R | Hsp21005ORF12670P (87% identity) | Hsp0012ORF10580P | |
| 10580 | M | M.HheASB1ORF9020P (92% identity) | M.Hsp0012ORF10580P | |
| 10590 | Molybdopterin-guanine dinucleotide biosynthesis | |||
| 14080 | Hemolysin Tly | |||
| 14090 | M | M.HheASB1ORF8950P (83% identity) | M.Hsp0012ORF14090P | |
| 14100 | 74 aa hypothetical protein | |||
| 14650 | Dephospho-CoA kinase CoaE | |||
| 14660 | M | M.HaiASB7ORF4230P (90% identity) | M.Hsp0012ORF14660P | |
| 14670 | 194 aa hypothetical protein | |||
| plasmid pNHP190012_3 | ||||
| 16900 | 142 aa hypothetical protein | |||
| ??? | M | M2.HsuHS1ORF19120P (75% identity) | M1.Hsp0012ORF16910P | |
| 16920 | R | HsuHS1ORF19120P (75% identity) | Hsp0012ORF16910P | |
| 16930 | M | M1.HsuHS1ORF19120P (80% identity) | M2.Hsp0012ORF16910P | |
| 16940 | 209 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8330 | 131 aa hypothetical protein | |||
| 8340 | R | HaiASB7McrCP (42% identity) | Hsp0012McrCP | |
| 8350 | R | HbiCMcrB2P (16% identity) | Hsp0012McrBBP | |
| 8360 | 123 aa hypothetical protein | |||
| 8370 | R | HbiCMcrB2P (11% identity) | Hsp0012McrBAP | |
| 8380 | 50 aa hypothetical protein | |||