Helicobacter species NHP19-0003 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Helicobacter species NHP19-0003 RM systems
Ref: Rimbara,E. and Suzuki,M. unpublished
REBASE ref # 32762
| Sequence length: | GenBank #: | |
| Chromosome: | 1,539,826 bp | AP024814 |
| plasmid pNHP190003_3: | 15,031 bp | AP024817 |
REBASE acronym: Hsp0003
Org_num: 50850
All begin NHP190003_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 460 | 80 aa hypothetical protein | |||
| 470 | M | M.Hhe1ORF14010P (84% identity) | M.Hsp0003ORF470P | |
| 480 | Shikimate 5-dehydrogenase | |||
| 3350 | 82 aa hypothetical protein | |||
| 3360 | M | M.HbiCORF16620P (59% identity) | M.Hsp0003ORF3360P | |
| 3370 | 70 aa hypothetical protein | |||
| 4940 | 96 aa hypothetical protein | |||
| 4950 | RM | Hsp21005ORF1870P (66% identity) | Hsp0003ORF4950P | |
| 4960 | 128 aa hypothetical protein | |||
| 5170 | 113 aa hypothetical protein | |||
| 5180 | M | M.Hsp21005ORF14850P (85% identity) | M.Hsp0003ORF5180P | |
| 5190 | 64 aa hypothetical protein | |||
| 8310 | 177 aa hypothetical protein | |||
| ??? | M | M.HaiASB7ORF4230P (91% identity) | M.Hsp0003ORF8320P | |
| 8340 | Dephospho-CoA kinase CoaE | |||
| 8700 | Molybdenum cofactor biosynthesis protein A MoaA | |||
| 8710 | M | M.Hsp0012ORF10550P (84% identity) | M.Hsp0003ORF8710P | |
| 8720 | 217 aa hypothetical protein | |||
| 8720 | 217 aa hypothetical protein | |||
| 8730 | R | Hsp21005ORF12670P (85% identity) | Hsp0003ORF8740P | |
| ??? | M | M.Hsp21005ORF12670P (90% identity) | M.Hsp0003ORF8740P | |
| 8760 | 169 aa hypothetical protein | |||
| 11300 | outer membrane protein HorD | |||
| 11310 | M | M.HheASB1ORF2280P (96% identity) | M.Hsp0003ORF11310P | |
| 11320 | Cysteine-rich protein X | |||
| 11660 | 434 aa hypothetical protein | |||
| 11670 | M | M.Hhe1ORF18680P (89% identity) | M.Hsp0003ORF11670P | |
| 11680 | R | HheASB1ORF14150P (85% identity) | Hsp0003ORF11670P | |
| 11690 | 326 aa hypothetical protein | |||
| 12790 | Hemolysin Tly | |||
| 12800 | M | M.Hsp21005ORF16020P (80% identity) | M.Hsp0003ORF12800P | |
| 12810 | 74 aa hypothetical protein | |||
| 13000 | 59 aa hypothetical protein | |||
| 13010 | M | M.HheASB1ORF11070P (88% identity) | M.Hsp0003ORF13010P | |
| 13020 | R | HheASB1ORF11070P (83% identity) | Hsp0003ORF13010P | |
| 13030 | 124 aa hypothetical protein | |||
| 13870 | 72 aa hypothetical protein | |||
| 13880 | RM | HaiASB7ORF15900AP (55% identity) | Hsp0003ORF13880P | |
| 13890 | DUF3972 domain-containing protein | |||
| 14190 | 60 kDa chaperonin | |||
| 14200 | M | M.HheASB1ORF8390P (88% identity) | M.Hsp0003ORF14200P | |
| 14210 | R | HheASB1ORF8390P (74% identity) | Hsp0003ORF14200P | |
| 14220 | NADPH-dependent 7-cyano-7-deazaguanine reductase | |||
| 15110 | IS1595 family transposase | |||
| 15120 | M | M.HheASB1ORF11910P (93% identity) | M.Hsp0003ORF15120P | |
| 15130 | 52 aa hypothetical protein | |||
| plasmid pNHP190003_3 | ||||
| 16280 | 72 aa hypothetical protein | |||
| 16290 | M | M1.Hsa61945ORF6335P (68% identity) | M1.Hsp0003ORF16290P | |
| 16300 | M | M1.Bhy375ORF10060P (50% identity) | M2.Hsp0003ORF16290P | |
| 16310 | R | HciP01DORFMP (48% identity) | Hsp0003ORF16290P | |
| 16320 | 51 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7350 | 103 aa hypothetical protein | |||
| 7360 | R | Hsp21005McrCP (83% identity) | Hsp0003McrCP | |
| 7370 | 101 aa hypothetical protein | |||
| 7380 | R | Hch13205McrBP (17% identity) | Hsp0003McrBP | |
| 7390 | 110 aa hypothetical protein | |||