Xanthomonas campestris pv. campestris Xcc-C7 |
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Putative Xanthomonas campestris pv. campestris Xcc-C7 RM systems
Ref: Singh,D. and Kesharwani,A.K. unpublished
REBASE ref # 33029
Complete sequence: 5,121,051 bp
GenBank #: CP077958
REBASE acronym: XcaC7
Org_num: 51964
All begin KPR34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6535 | M48 family metallopeptidase | |||
| 6540 | R | XcaXY11ORF6160P (100% identity) | CAAGNNNNNCTTA | XcaC7ORF6555P |
| 6545 | S | S2.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | S.XcaC7ORF6555P |
| 6550 | damage-inducible protein D | |||
| 6555 | M | M.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | M.XcaC7ORF6555P |
| 6560 | restriction endonuclease subunit S | |||
| 16915 | 98 aa hypothetical protein | |||
| 16920 | R | XcaTJORFEP (89% identity) | XcaC7ORF16935P | |
| 16925 | S | S.XcaTJORFEP (74% identity) | S.XcaC7ORF16935P | |
| 16930 | virulence RhuM family protein | |||
| 16935 | M | M.XcaTJORFEP (100% identity) | M.XcaC7ORF16935P | |
| 16940 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3505 | IS3-like element IS1404 family transposase | |||
| 3510 | R | XcaYORFAP (98% identity) | XcaC7ORF3510P | |
| 3515 | 90 aa hypothetical protein | |||
| 11110 | IS3-like element IS476 family transposase | |||
| 11115 | RM | XcaSB80ORF10635P (100% identity) | XcaC7ORF11115P | |
| 11120 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 235 | RluA family pseudouridine synthase | |||
| 240 | R | XcaYMrr2P (90% identity) | XcaC7MrrP | |
| 245 | topoisomerase DNA-binding C4 zinc finger | |||
| 16935 | type I restriction-modification system subunit | |||
| 16940 | R | XcaYMrrP (100% identity) | XcaC7Mrr2P | |
| 16945 | type II toxin-antitoxin system RelE/ParE family | |||