Clostridium species 001 |
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Putative Clostridium species 001 RM systems
Ref: Mitchell,W. et al. unpublished
REBASE ref # 32669
Complete sequence: 4,614,182 bp
GenBank #: CP020473
REBASE acronym: Csps001
Org_num: 50470
All begin B5S50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | flavodoxin | |||
| 3555 | R | Osp1255ORF16400P (82% identity) | Csps001ORF3565P | |
| 3560 | S | S.Wco150ORF8355P (74% identity) | S.Csps001ORF3565P | |
| 3565 | M | M.Cma2767ORF26920P (89% identity) | M.Csps001ORF3565P | |
| 3570 | phosphatase | |||
| 8395 | 190 aa hypothetical protein | |||
| 8400 | R | CspVKFIVP (98% identity) | Csps001ORF8430P | |
| 8405 | 94 aa hypothetical protein | |||
| 8410 | 191 aa hypothetical protein | |||
| 8415 | 116 aa hypothetical protein | |||
| 8420 | 290 aa hypothetical protein | |||
| 8425 | S | S.CspVKFIV (50% identity) | S.Csps001ORF8430P | |
| 8430 | M | M.CspVKFIV (96% identity) | M.Csps001ORF8430P | |
| 8435 | 130 aa hypothetical protein | |||
| 11025 | 195 aa hypothetical protein | |||
| 11030 | R | Csp901ORF3515P (98% identity) | Csps001ORF11040P | |
| 11035 | 542 aa hypothetical protein | |||
| 11040 | M | M.Csp901ORF3515P (97% identity) | M.Csps001ORF11040P | |
| 11045 | S | S.PsoC125ORF4310P (61% identity) | S.Csps001ORF11040P | |
| 11050 | 134 aa hypothetical protein | |||
| 12755 | restriction endonuclease subunit M | |||
| 12760 | R | CcaPORF2691P (93% identity) | Csps001ORF12770P | |
| ??? | S | S.PfrMB139ORFEP (52% identity) | S.Csps001ORF12770P | |
| 12770 | M | M.CcaP7TORFDP (95% identity) | M.Csps001ORF12770P | |
| 12775 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2490 | 816 aa hypothetical protein | |||
| 2495 | RM | MauBONORF2005P (20% identity) | Csps001ORF2495P | |
| 2500 | 1201 aa hypothetical protein | |||
| 4675 | 208 aa hypothetical protein | |||
| 4680 | RM | CspAWRPORF15120P (95% identity) | Csps001ORF4680P | |
| 4685 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | |||
| 5595 | 745 aa hypothetical protein | |||
| 5600 | RM | CljORF32690P (69% identity) | Csps001ORF5600P | |
| 5605 | 1188 aa hypothetical protein | |||
| 6330 | anti-sigma F factor antagonist | |||
| 6335 | M | M.CspVKFI (95% identity) | CAAAAAR | M.Csps001ORF6335P |
| 6340 | delta-lactam-biosynthetic de-N-acetylase | |||
| 12390 | 131 aa hypothetical protein | |||
| 12395 | M | M.Cty7086ORFBP (88% identity) | M.Csps001ORF12395P | |
| 12400 | integrase | |||
| 15575 | MATE family efflux transporter | |||
| 15580 | M | M.CspVKFORFEP (95% identity) | M.Csps001ORF15580P | |
| 15585 | 69 aa hypothetical protein | |||
| 17350 | 132 aa hypothetical protein | |||
| 17355 | M | M.Csps001ORF12395P (86% identity) | M.Csps001ORF17355P | |
| 17360 | 70 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18420 | HXXEE domain-containing protein | |||
| 18425 | R | Csp1ORFCP (77% identity) | Csps001ORF18425P | |
| 18430 | DNA mismatch repair protein MutT | |||