Escherichia coli FDAARGOS_1376 |
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Putative Escherichia coli FDAARGOS_1376 RM systems
Ref: Walk,S. et al. unpublished
REBASE ref # 32723
| Sequence length: | GenBank #: | |
| Chromosome: | 5,095,340 bp | CP077243 |
| plasmid unnamed2: | 91,885 bp | CP077245 |
| plasmid unnamed3: | 63,960 bp | CP077246 |
REBASE acronym: Eco1376
Org_num: 50673
All begin I6L06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4315 | adenine/cytosine-specific restriction | |||
| 4320 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco1376ORF4325P |
| 4325 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco1376ORF4325P |
| 4330 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco1376ORF4325P |
| 4335 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 80 | NinE family protein | |||
| 85 | M | M.EcoR11ORF20620P (100% identity) | GATC | M.Eco1376ORF85P |
| 90 | recombination protein NinB | |||
| 10055 | cell division protein DamX | |||
| 10060 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1376DamP |
| 10065 | ribulose-phosphate 3-epimerase | |||
| 10690 | DUF2556 family protein | |||
| 10695 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco1376ORF10695P |
| 10700 | DNA-binding transcriptional regulator Fis | |||
| 17925 | phosphohydrolase | |||
| 17930 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco1376DcmP |
| 17935 | V | V.SsoSE61DcmP (100% identity) | V.Eco1376DcmP | |
| 17940 | drug/metabolite exporter YedA | |||
| 19995 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco1376ORF20000P | |
| 20005 | 95 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25485 | 73 aa hypothetical protein | |||
| 25490 | M | M.Sso866ORF27155P (100% identity) | M.Eco1376ORF25490P | |
| 25495 | 104 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 25735 | 97 aa hypothetical protein | |||
| 25740 | M | M.Xca80ORFEP (100% identity) | M.Eco1376ORF25740P | |
| 25745 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5675 | S8 family peptidase | |||
| 5680 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco1376ORF5680P |
| 5685 | R | Eco1377ORF10835P (100% identity) | ACCACC | Eco1376ORF5680P |
| 5690 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4310 | GTPase | |||
| 4315 | R | Ssp28760MrrP (100% identity) | Eco1376MrrP | |
| 4320 | type I restriction-modification system | |||
| 4335 | endoribonuclease SymE | |||
| 4340 | R | Ssp28760McrBP (100% identity) | Eco1376McrB2P | |
| 4345 | R | Ssp28760McrCP (100% identity) | Eco1376McrC2P | |
| 5715 | IS3 family transposase | |||
| 5720 | R | SflN97McrCP (100% identity) | Eco1376McrCP | |
| 5725 | R | Kpn0718McrBP (100% identity) | Eco1376McrBP | |
| 5730 | zinc-ribbon domain-containing protein | |||