Escherichia coli O85:H1 03-3638 |
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Putative Escherichia coli O85:H1 03-3638 RM systems
Ref: Weedmark,K. et al. unpublished
REBASE ref # 32731
| Sequence length: | GenBank #: | |
| Chromosome: | 4,932,527 bp | CP076714 |
| plasmid unnamed1: | 133,419 bp | CP076715 |
| plasmid unnamed2: | 92,478 bp | CP076716 |
REBASE acronym: Eco3638
Org_num: 50709
All begin KQ219_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10310 | adenine/cytosine-specific restriction | |||
| 10315 | R | Eco9085IP (100% identity) | TGANNNNNNNNTGCT | Eco3638ORF10320P |
| 10320 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco3638ORF10320P |
| 10325 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco3638ORF10320P |
| 10330 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 165 | phosphohydrolase | |||
| 170 | M | M.Eco9085DcmP (100% identity) | CCWGG | M.Eco3638DcmP |
| 175 | V | V.SflC32DcmP (74% identity) | V.Eco3638DcmP | |
| 180 | drug/metabolite exporter YedA | |||
| 8440 | phage terminase large subunit | |||
| 8445 | M | M.EspP049ORF3912P (100% identity) | M.Eco3638ORF8445P | |
| 8450 | DUF1804 family protein | |||
| 12300 | phage lysis protein EssD | |||
| 12305 | M | M.Sso63633ORF22290P (99% identity) | M.Eco3638ORF12305P | |
| 12310 | 67 aa hypothetical protein | |||
| 12340 | LexA family transcriptional regulator | |||
| 12345 | M | M.EcoXJ55ORF18610P (100% identity) | GATC | M.Eco3638ORF12345P |
| 12350 | PerC family transcriptional regulator | |||
| 12395 | 180 aa hypothetical protein | |||
| 12400 | M | M.EcoR44ORF23150P (99% identity) | M.Eco3638ORF12400P | |
| 12405 | ead/Ea22-like family protein | |||
| 14650 | osmoprotectant transport activator ProQ | |||
| 14655 | M | M.SflFF24DndBP (100% identity) | M.Eco3638DndBP | |
| 14660 | DNA phosphorothioation system sulfurtransferase | |||
| 14655 | DNA sulfur modification protein DndB | |||
| 14660 | M | M.SflFF24DndCP (100% identity) | M.Eco3638DndCP | |
| 14665 | DNA sulfur modification protein DndD | |||
| 14660 | DNA phosphorothioation system sulfurtransferase | |||
| 14665 | M | M.SflFF24DndDP (100% identity) | M.Eco3638DndDP | |
| 14670 | DNA sulfur modification protein DndE | |||
| 14665 | DNA sulfur modification protein DndD | |||
| 14670 | M | M.SflFF24DndEP (100% identity) | M.Eco3638DndEP | |
| 14675 | DNA phosphorothioation-associated DGQHR protein | |||
| 14680 | 172 aa hypothetical protein | |||
| 14685 | R | Sen8497DptHP (100% identity) | Eco3638DptHP | |
| 14690 | DNA phosphorothioation-dependent restriction | |||
| 14690 | R | Sen8497DptGP (100% identity) | Eco3638DptGP | |
| 14695 | DNA phosphorothioation-dependent restriction | |||
| 14690 | DNA phosphorothioation-dependent restriction | |||
| 14695 | R | SenLY67DptFP (100% identity) | Eco3638DptFP | |
| 14700 | outer membrane beta-barrel protein | |||
| 16255 | cell division protein DamX | |||
| 16260 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3638DamP |
| 16265 | ribulose-phosphate 3-epimerase | |||
| 16850 | DUF2556 family protein | |||
| 16855 | M | M.Eco9085ORF496P (100% identity) | ATGCAT | M.Eco3638ORF16855P |
| 16860 | DNA-binding transcriptional regulator Fis | |||
| 20140 | DUF3850 domain-containing protein | |||
| 20145 | M | M.Ema605ORF7185P (99% identity) | GATC | M.Eco3638ORF20145P |
| 20150 | replication endonuclease | |||
| plasmid unnamed1 | ||||
| 24390 | 73 aa hypothetical protein | |||
| 24395 | M | M.SflN101ORF24625P (94% identity) | M.Eco3638ORF24395P | |
| 24400 | 103 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24600 | 216 aa hypothetical protein | |||
| 24605 | M | M.SenThORF23620P (100% identity) | M.Eco3638ORF24605P | |
| 24610 | glutamine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10305 | GTPase | |||
| 10310 | R | Ssp28760MrrP (100% identity) | Eco3638MrrP | |
| 10315 | type I restriction-modification system | |||
| 10330 | endoribonuclease SymE | |||
| 10335 | R | Eco9085McrBP (98% identity) | Eco3638McrBP | |
| 10340 | R | Eco9085McrCP (100% identity) | Eco3638McrCP | |