Escherichia coli S10EC |
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Putative Escherichia coli S10EC RM systems
Ref: Alvarez-Fraga,L. et al. unpublished
REBASE ref # 32733
| Sequence length: | GenBank #: | |
| Chromosome: | 5,052,030 bp | CP076697 |
| plasmid pS10EC_A: | 102,381 bp | CP076699 |
REBASE acronym: EcoS10EC
Org_num: 50725
All begin KQ259_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1520 | ash family protein | |||
| 1525 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS10ECORF1530P |
| 1530 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS10ECORF1530P |
| 1535 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS10ECORF1530P |
| 1540 | type IV toxin-antitoxin system AbiEi family | |||
| 24190 | endoribonuclease SymE | |||
| 24195 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS10ECORF24205P |
| 24200 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS10ECORF24205P |
| 24205 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS10ECORF24205P |
| 24210 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5005 | 72 aa hypothetical protein | |||
| 5010 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS10ECORF5010P | |
| 5015 | helix-turn-helix domain-containing protein | |||
| 10430 | drug/metabolite exporter YedA | |||
| 10435 | V | V.EcoTO148Dcm2P (100% identity) | V.EcoS10ECDcmP | |
| 10440 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS10ECDcmP |
| 10445 | phosphohydrolase | |||
| 17835 | DNA-binding transcriptional regulator Fis | |||
| 17840 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS10ECORF17840P |
| 17845 | DUF2556 family protein | |||
| 18435 | ribulose-phosphate 3-epimerase | |||
| 18440 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS10ECDamP |
| 18445 | cell division protein DamX | |||
| 19955 | BREX system P-loop protein BrxC | |||
| 19960 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoS10ECORF19960P |
| 19965 | BREX-1 system phosphatase PglZ type A | |||
| 23850 | helix-turn-helix domain-containing protein | |||
| 23855 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoS10ECORF23855P |
| 23860 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS10ECORF23855P |
| 23865 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS10ECORF23855P |
| 23870 | McrC family protein | |||
| plasmid pS10EC_A | ||||
| 24970 | 73 aa hypothetical protein | |||
| 24975 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS10ECORF24975P |
| 24980 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23865 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 23870 | R | EcosS9McrCP (100% identity) | EcoS10ECMcrCP | |
| 23875 | R | EcosS3McrBP (100% identity) | EcoS10ECMcrBP | |
| 23880 | glycosyltransferase | |||