Escherichia coli S22EC |
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Putative Escherichia coli S22EC RM systems
Ref: Alvarez-Fraga,L. et al. unpublished
REBASE ref # 32733
| Sequence length: | GenBank #: | |
| Chromosome: | 5,085,697 bp | CP076687 |
| plasmid pS22EC_A: | 116,936 bp | CP076688 |
REBASE acronym: EcoS22EC
Org_num: 50729
All begin KQ258_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1525 | ash family protein | |||
| 1530 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS22ECORF1535P |
| 1535 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS22ECORF1535P |
| 1540 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS22ECORF1535P |
| 1545 | type IV toxin-antitoxin system AbiEi family | |||
| 24055 | 165 aa hypothetical protein | |||
| 24060 | R | EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | EcoS22ECORF24075P |
| 24065 | DUF4268 domain-containing protein | |||
| 24070 | S | S.EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | S.EcoS22ECORF24075P |
| 24075 | M | M.EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | M.EcoS22ECORF24075P |
| 24080 | toll/interleukin-1 receptor domain-containing | |||
| 24395 | 237 aa hypothetical protein | |||
| 24400 | R | EcoZ247ORF19790P (100% identity) | EcoS22ECORF24410P | |
| 24405 | S | S.EcoZ247ORF19790P (100% identity) | S.EcoS22ECORF24410P | |
| 24410 | M | M.EcoZ247ORF19790P (100% identity) | M.EcoS22ECORF24410P | |
| 24415 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5230 | 71 aa hypothetical protein | |||
| 5235 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoS22ECORF5235P | |
| 5240 | helix-turn-helix domain-containing protein | |||
| 10520 | drug/metabolite exporter YedA | |||
| 10525 | V | V.SflC32DcmP (74% identity) | V.EcoS22ECDcmP | |
| 10530 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS22ECDcmP |
| 10535 | phosphohydrolase | |||
| 14415 | tyrosine-type recombinase/integrase | |||
| 14420 | M | M.EcoT040ORF14860P (97% identity) | M.EcoS22ECORF14420P | |
| 14425 | R | EcoC9119ORF1429P (100% identity) | EcoS22ECORF14420P | |
| 14430 | 344 aa hypothetical protein | |||
| 18210 | DNA-binding transcriptional regulator Fis | |||
| 18215 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS22ECORF18215P |
| 18220 | DUF2556 family protein | |||
| 18810 | ribulose-phosphate 3-epimerase | |||
| 18815 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS22ECDamP |
| 18820 | cell division protein DamX | |||
| 24045 | integrase arm-type DNA-binding domain-containing | |||
| 24050 | R | EcoW004ORF18630P (100% identity) | GAAC | EcoS22ECORF24050P |
| 24055 | 165 aa hypothetical protein | |||
| plasmid pS22EC_A | ||||
| 25045 | 103 aa hypothetical protein | |||
| 25050 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS22ECORF25050P |
| 25055 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24410 | type I restriction-modification system subunit | |||
| 24415 | R | EcoW004GmrDP (100% identity) | EcoS22ECGmrDP | |
| 24420 | cell filamentation protein Fic | |||