Clostridioides difficile S-0253 |
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Putative Clostridioides difficile S-0253 RM systems
Ref: O'Grady,K.I. unpublished
REBASE ref # 32667
Complete sequence: 4,089,134 bp
GenBank #: CP076401
REBASE acronym: CdiS0253
Org_num: 50466
All begin KNZ77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15165 | DUF262 domain-containing HNH endonuclease family | |||
| 15170 | R | CdiJ21ORF30970P (100% identity) | GAANNNNNNCTG | CdiS0253ORF15190P |
| 15175 | 142 aa hypothetical protein | |||
| 15180 | nucleotidyltransferase domain-containing | |||
| 15185 | S | S.Cdo002III (100% identity) | GAANNNNNNCTG | S.CdiS0253ORF15190P |
| 15190 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNCTG | M.CdiS0253ORF15190P |
| 15195 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2490 | 53 aa hypothetical protein | |||
| 2495 | C | C.PdiZ31ORF415P (100% identity) | C.CdiS0253ORF2500P | |
| 2500 | RM | Cdo002IV (99% identity) | GCMGAAG | CdiS0253ORF2500P |
| 2505 | 224 aa hypothetical protein | |||
| 13630 | patatin-like phospholipase family protein | |||
| 13635 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiS0253ORF13635P |
| 13640 | Rrf2 family transcriptional regulator | |||
| 15580 | caspase family protein | |||
| 15585 | M | M.Cdo002V (100% identity) | GGNCC | M.CdiS0253ORF15585P |
| 15590 | R | CdiJ21ORF31790P (100% identity) | GGNCC | CdiS0253ORF15585P |
| 15595 | 92 aa hypothetical protein | |||
| 15640 | SIR2 family protein | |||
| 15645 | R | M.Cdo002II (49% identity) | GATC | CdiS0253ORF15650P |
| 15650 | M | M.Cdo002II (49% identity) | M.CdiS0253ORF15650P | |
| 15655 | 115 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10175 | sigma 54-interacting transcriptional regulator | |||
| 10180 | R | Cdo002McrCP (100% identity) | CdiS0253McrCP | |
| 10185 | R | Pdi6602McrBP (100% identity) | CdiS0253McrBP | |
| 10190 | cell division protein | |||