Clostridioides difficile Cd21 |
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Putative Clostridioides difficile Cd21 RM systems
Ref: Zhao,C. unpublished
REBASE ref # 31777
Complete sequence: 4,113,713 bp
GenBank #: CP037805
REBASE acronym: CdiCd21
Org_num: 50451
All begin E1H44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16875 | DUF262 domain-containing protein | |||
| 16880 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | CdiCd21ORF16905P |
| 16885 | 142 aa hypothetical protein | |||
| 16890 | nucleotidyltransferase domain-containing | |||
| 16895 | 102 aa hypothetical protein | |||
| 16900 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.CdiCd21ORF16905P |
| 16905 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.CdiCd21ORF16905P |
| 16910 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3535 | 73 aa hypothetical protein | |||
| 3540 | C | C.PdiZ31ORF415P (100% identity) | C.CdiCd21ORF3540P | |
| 3545 | N-6 DNA methylase | |||
| 3540 | XRE family transcriptional regulator | |||
| 3545 | RM | Cdo002IV (99% identity) | GCMGAAG | CdiCd21ORF3545P |
| 3550 | 224 aa hypothetical protein | |||
| 4630 | SrtB-anchored collagen-binding adhesin | |||
| 4635 | M | M.CdiCd13ORF3645P (99% identity) | M.CdiCd21ORF4635P | |
| 4640 | DUF961 domain-containing protein | |||
| 15535 | patatin-like phospholipase family protein | |||
| 15540 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiCd21ORF15540P |
| 15545 | Rrf2 family transcriptional regulator | |||
| 17285 | LytTR family transcriptional regulator | |||
| 17290 | M | M.CdiST42DndCP (100% identity) | M.CdiCd21DndCP | |
| 17295 | DNA sulfur modification protein DndD | |||
| 17290 | DNA phosphorothioation system sulfurtransferase | |||
| 17295 | M | M.CdiST42DndDP (100% identity) | M.CdiCd21DndDP | |
| 17300 | DUF1832 domain-containing protein | |||
| 17295 | DNA sulfur modification protein DndD | |||
| 17300 | M | M.CdiCd24DndEP (100% identity) | M.CdiCd21DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 17300 | DUF1832 domain-containing protein | |||
| ??? | R | CdiST42DptHP (100% identity) | CdiCd21DptHP | |
| 17315 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 17315 | R | CdiST42DptGP (100% identity) | CdiCd21DptGP | |
| 17320 | DNA phosphorothioation-dependent restriction | |||
| 17315 | DNA phosphorothioation-dependent restriction | |||
| 17320 | R | CdiST42DptFP (100% identity) | CdiCd21DptFP | |
| 17325 | 90 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11770 | AAA family ATPase | |||
| 11775 | R | Cdo002McrCP (100% identity) | CdiCd21McrCP | |
| 11780 | R | Pdi6602McrBP (100% identity) | CdiCd21McrBP | |
| 11785 | cell division protein | |||