Clostridioides difficile Cd24 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridioides difficile Cd24 RM systems
Ref: Zhao,C. unpublished
REBASE ref # 31777
Complete sequence: 4,071,445 bp
GenBank #: CP037801
REBASE acronym: CdiCd24
Org_num: 50453
All begin E1H47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1395 | ketose-bisphosphate aldolase | |||
| 1400 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.CdiCd24ORF1400P |
| 1405 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.CdiCd24ORF1400P |
| 1410 | 102 aa hypothetical protein | |||
| 1415 | nucleotidyltransferase domain-containing | |||
| 1420 | 142 aa hypothetical protein | |||
| 1425 | R | CdiCd21ORF16905P (100% identity) | CANNNNNNNTAAAG | CdiCd24ORF1400P |
| 1430 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 975 | 90 aa hypothetical protein | |||
| 980 | R | CdiST42DptFP (99% identity) | CdiCd24DptFP | |
| 985 | DNA phosphorothioation-dependent restriction | |||
| 980 | DNA phosphorothioation-dependent restriction | |||
| 985 | R | CdiST42DptGP (91% identity) | CdiCd24DptGP | |
| 990 | DNA phosphorothioation-dependent restriction | |||
| 990 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | CdiST42DptHP (99% identity) | CdiCd24DptHP | |
| 1005 | DUF1832 domain-containing protein | |||
| ??? | hypothetical protein | |||
| 1005 | M | M.CdiCd21DndEP (100% identity) | M.CdiCd24DndEP | |
| 1010 | DNA sulfur modification protein DndD | |||
| 1005 | DUF1832 domain-containing protein | |||
| 1010 | M | M.CdiST42DndDP (100% identity) | M.CdiCd24DndDP | |
| 1015 | DNA phosphorothioation system sulfurtransferase | |||
| 1010 | DNA sulfur modification protein DndD | |||
| 1015 | M | M.CdiST42DndCP (100% identity) | M.CdiCd24DndCP | |
| 1020 | LytTR family transcriptional regulator | |||
| 2760 | Rrf2 family transcriptional regulator | |||
| 2765 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiCd24ORF2765P |
| 2770 | patatin-like phospholipase family protein | |||
| 14555 | 224 aa hypothetical protein | |||
| 14560 | RM | Cdo002IV (99% identity) | GCMGAAG | CdiCd24ORF14560P |
| 14565 | C | C.PdiZ31ORF415P (100% identity) | C.CdiCd24ORF14560P | |
| 14570 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6530 | cell division protein | |||
| 6535 | R | Pdi6602McrBP (100% identity) | CdiCd24McrBP | |
| 6540 | R | Cdo002McrCP (100% identity) | CdiCd24McrCP | |
| 6545 | AAA family ATPase | |||