Akkermansia muciniphila Akk1616 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Akkermansia muciniphila Akk1616 RM systems
Ref: Becken,B. et al. mBio 12 (3), e00478-21 (2021)
REBASE ref # 32602
Complete sequence: 3,002,740 bp
GenBank #: CP072030
REBASE acronym: Amu1616
Org_num: 50180
All begin J5W54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9460 | dihydrolipoyl dehydrogenase | |||
| 9465 | R | AspMGS1ORFGP (100% identity) | Amu1616ORF9475P | |
| 9470 | four helix bundle protein | |||
| 9475 | M | M.AspMGS1ORFGP (100% identity) | M.Amu1616ORF9475P | |
| 9480 | S | S1.Amu16145ORF9525P (100% identity) | S1.Amu1616ORF9475P | |
| 9485 | S | S1.AspMGS1ORFGP (53% identity) | S2.Amu1616ORF9475P | |
| 9490 | S | S3.Amu16145ORF9525P (100% identity) | S3.Amu1616ORF9475P | |
| 9495 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | DEAD/DEAH box helicase family protein | |||
| 65 | M | M.Amu16145ORF70P (100% identity) | M.Amu1616ORF65P | |
| 70 | DUF3780 domain-containing protein | |||
| 6430 | 1242 aa hypothetical protein | |||
| 6435 | M | M.Amu16145ORF6495P (100% identity) | M.Amu1616ORF6435P | |
| 6440 | 500 aa hypothetical protein | |||
| 7910 | 121 aa hypothetical protein | |||
| 7915 | M | M.AspMGS1ORFKP (100% identity) | M.Amu1616ORF12495P | |
| 7920 | 165 aa hypothetical protein | |||
| 8630 | DUF932 domain-containing protein | |||
| ??? | RM | AspMGS1ORFIP (100% identity) | Amu1616ORF8635P | |
| 8645 | 224 aa hypothetical protein | |||
| 8800 | site-specific integrase | |||
| 8805 | RM | AspMGS1ORFFP (100% identity) | Amu1616ORF8805P | |
| 8810 | 648 aa hypothetical protein | |||
| 10625 | 196 aa hypothetical protein | |||
| 10630 | M | M.AspMGS1ORFHP (87% identity) | M.Amu1616ORF10630P | |
| 10635 | tyrosine recombinase | |||
| 11245 | tyrosine-type recombinase/integrase | |||
| 11250 | M | M1.Amuk1990ORF11190P (100% identity) | M1.Amu1616ORF11250P | |
| 11255 | M | M2.Amu16145ORF11310P (100% identity) | M2.Amu1616ORF11250P | |
| 11260 | RM | Amu16145ORF11310P (100% identity) | Amu1616ORF11250P | |
| 11265 | MATE family efflux transporter | |||
| 11520 | 139 aa hypothetical protein | |||
| 11525 | M | M2.PmeBin158ORFIP (100% identity) | M1.Amu1616ORF11525P | |
| 11530 | M | M1.PmeBin158ORFIP (100% identity) | M2.Amu1616ORF11525P | |
| 11535 | 450 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12235 | glycoside hydrolase family 16 protein | |||
| 12240 | R | AspMGS1ORFEP (100% identity) | Amu1616ORF12240P | |
| 12245 | 300 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9905 | ApaG domain | |||
| 9910 | R | AspMGS1McrBP (100% identity) | Amu1616McrBP | |
| 9915 | R | AspMGS1McrCP (100% identity) | Amu1616McrCP | |
| 9920 | DEAD/DEAH box helicase | |||