Akkermansia muciniphila Akk1613 |
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Putative Akkermansia muciniphila Akk1613 RM systems
Ref: Becken,B. et al. mBio 12 (3), e00478-21 (2021)
REBASE ref # 32602
Complete sequence: 2,990,835 bp
GenBank #: CP072032
REBASE acronym: Amu1613
Org_num: 50178
All begin J5W72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9400 | dihydrolipoyl dehydrogenase | |||
| 9405 | R | AspMGS1ORFGP (97% identity) | Amu1613ORF9415P | |
| 9410 | four helix bundle protein | |||
| 9415 | M | M.AspMGS1ORFGP (100% identity) | M.Amu1613ORF9415P | |
| 9420 | S | S3.Amu1616ORF9475P (87% identity) | S1.Amu1613ORF9415P | |
| 9425 | S | S2.Amu16145ORF9525P (100% identity) | S2.Amu1613ORF9415P | |
| 9430 | S | S1.Amu1616ORF9475P (84% identity) | S3.Amu1613ORF9415P | |
| 9435 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | DEAD/DEAH box helicase family protein | |||
| 65 | M | M.Amu1616ORF65P (100% identity) | M.Amu1613ORF65P | |
| 70 | DUF3780 domain-containing protein | |||
| 6385 | 1242 aa hypothetical protein | |||
| 6390 | M | M.Amu1616ORF6435P (100% identity) | M.Amu1613ORF6390P | |
| 6395 | 500 aa hypothetical protein | |||
| 7865 | 121 aa hypothetical protein | |||
| 7870 | M | M.AspMGS1ORFKP (100% identity) | M.Amu1613ORF12455P | |
| 7875 | 165 aa hypothetical protein | |||
| 8575 | DUF932 domain-containing protein | |||
| ??? | RM | AspMGS1ORFIP (100% identity) | Amu1613ORF8580P | |
| 8590 | 224 aa hypothetical protein | |||
| 8745 | site-specific integrase | |||
| 8750 | RM | AspMGS1ORFFP (100% identity) | Amu1613ORF8750P | |
| 8755 | 648 aa hypothetical protein | |||
| 10565 | 196 aa hypothetical protein | |||
| 10570 | M | M.AspMGS1ORFHP (87% identity) | M.Amu1613ORF10570P | |
| 10575 | tyrosine recombinase | |||
| 11185 | tyrosine-type recombinase/integrase | |||
| 11190 | M | M1.Amuk1990ORF11190P (100% identity) | M1.Amu1613ORF11190P | |
| 11195 | M | M2.Amu1616ORF11250P (100% identity) | M2.Amu1613ORF11190P | |
| 11200 | RM | Amu1616ORF11250P (100% identity) | Amu1613ORF11190P | |
| 11205 | MATE family efflux transporter | |||
| 11465 | 139 aa hypothetical protein | |||
| 11470 | M | M1.Amu16145ORF11585P (100% identity) | M1.Amu1613ORF11470P | |
| 11475 | M | M1.PmeBin158ORFIP (100% identity) | M2.Amu1613ORF11470P | |
| 11480 | 450 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12185 | glycoside hydrolase family 16 protein | |||
| 12190 | R | AspMGS1ORFEP (100% identity) | Amu1613ORF12190P | |
| 12195 | 300 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9845 | ApaG domain | |||
| 9850 | R | AspMGS1McrBP (100% identity) | Amu1613McrBP | |
| 9855 | R | AspMGS1McrCP (100% identity) | Amu1613McrCP | |
| 9860 | DEAD/DEAH box helicase | |||