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Putative Akkermansia muciniphila Akk1610 RM systems
Ref: Becken,B. et al. mBio 12 (3), e00478-21 (2021)
REBASE ref # 32602
Complete sequence: 3,002,694 bp
GenBank #: CP072034
REBASE acronym: Amu1610
Org_num: 50176
All begin J5W60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
9485 | dihydrolipoyl dehydrogenase | |||
9490 | R | AspMGS1ORFGP (100% identity) | Amu1610ORF9500P | |
9495 | four helix bundle protein | |||
9500 | M | M.AspMGS1ORFGP (100% identity) | M.Amu1610ORF9500P | |
9505 | S | S3.AspMGS1ORFGP (100% identity) | S1.Amu1610ORF9500P | |
9510 | S | S2.AspMGS1ORFGP (100% identity) | S2.Amu1610ORF9500P | |
9515 | S | S1.AspMGS1ORFGP (96% identity) | S3.Amu1610ORF9500P | |
9520 | site-specific integrase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
60 | DEAD/DEAH box helicase family protein | |||
65 | M | M.Amu1616ORF65P (100% identity) | M.Amu1610ORF65P | |
70 | DUF3780 domain-containing protein | |||
6430 | 1242 aa hypothetical protein | |||
6435 | M | M.Amu1616ORF6435P (100% identity) | M.Amu1610ORF6435P | |
6440 | 500 aa hypothetical protein | |||
7925 | 121 aa hypothetical protein | |||
7930 | M | M.AspMGS1ORFKP (100% identity) | M.Amu1610ORF12520P | |
7935 | 146 aa hypothetical protein | |||
8645 | DUF932 domain-containing protein | |||
??? | RM | AspMGS1ORFIP (100% identity) | Amu1610ORF8650P | |
8660 | 224 aa hypothetical protein | |||
8820 | site-specific integrase | |||
8825 | RM | AspMGS1ORFFP (100% identity) | Amu1610ORF8825P | |
8830 | 648 aa hypothetical protein | |||
10645 | 196 aa hypothetical protein | |||
10650 | M | M.AspMGS1ORFHP (87% identity) | M.Amu1610ORF10650P | |
10655 | tyrosine recombinase | |||
11270 | tyrosine-type recombinase/integrase | |||
11275 | M | M1.Amuk1990ORF11190P (100% identity) | M1.Amu1610ORF11275P | |
11280 | M | M2.Amu1616ORF11250P (100% identity) | M2.Amu1610ORF11275P | |
11285 | RM | Amu1616ORF11250P (100% identity) | Amu1610ORF11275P | |
11290 | MATE family efflux transporter | |||
11545 | 139 aa hypothetical protein | |||
11550 | M | M2.PmeBin158ORFIP (100% identity) | M1.Amu1610ORF11550P | |
11555 | M | M1.PmeBin158ORFIP (100% identity) | M2.Amu1610ORF11550P | |
11560 | 450 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
12255 | glycoside hydrolase family 16 protein | |||
12260 | R | AspMGS1ORFEP (100% identity) | Amu1610ORF12260P | |
12265 | 300 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
9935 | ApaG domain | |||
9940 | R | AspMGS1McrBP (100% identity) | Amu1610McrBP | |
9945 | R | AspMGS1McrCP (100% identity) | Amu1610McrCP | |
9950 | DEAD/DEAH box helicase |