Xanthomonas citri pv. fuscans M12 |
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Putative Xanthomonas citri pv. fuscans M12 RM systems
Ref: O'Leary,M.L. and Gilbertson,R.L. unpublished
REBASE ref # 33030
| Sequence length: | GenBank #: | |
| Chromosome: | 5,050,918 bp | CP029267 |
| plasmid unnamedc: | 42,411 bp | CP029269 |
REBASE acronym: XciM12
Org_num: 51969
All begin DGN11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6440 | IS5 family transposase ISXfu1 | |||
| ??? | M | M.XciPR8FORF6160P (100% identity) | M.XciM12ORF6450P | |
| 6455 | 135 aa hypothetical protein | |||
| 6460 | S | S1.Xfu49ORF1227P (88% identity) | S1.XciM12ORF6450P | |
| 6465 | IS5 family transposase ISXfu1 | |||
| 6470 | IS5 family transposase ISXfu2 | |||
| ??? | S | S.Xci6166ORF13270P (75% identity) | S2.XciM12ORF6450P | |
| 6485 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5845 | phage portal protein | |||
| 5855 | M | M.Xar1494ORF3727P (92% identity) | M.XciM12ORF5855P | |
| 5860 | 182 aa hypothetical protein | |||
| 9645 | 86 aa hypothetical protein | |||
| 9650 | R | R2.XciPR8FORF14235P (100% identity) | R1.XciM12ORF9660P | |
| 9655 | R | Xfu49ORF2810P (100% identity) | R2.XciM12ORF9660P | |
| 9660 | M | M.XfuRORFBP (100% identity) | M.XciM12ORF9660P | |
| 9665 | V | V.XfuRORFBP (100% identity) | V.XciM12ORF9660P | |
| 9670 | AbrB/MazE/SpoVT family DNA-binding | |||
| plasmid unnamedc | ||||
| 22995 | recombinase | |||
| 23000 | M | M.Xsp98C4ORF22795P (100% identity) | CCCGGG | M.XciM12ORF23000P |
| 23005 | R | Xsp98C4ORF22795P (100% identity) | CCCGGG | XciM12ORF23000P |
| 23010 | 68 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6440 | IS5 family transposase ISXfu1 | |||
| 6445 | R | Xfu49MrrP (100% identity) | XciM12MrrP | |
| 6450 | SAM-dependent DNA methyltransferase | |||