Escherichia coli STEC2018-553 |
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Putative Escherichia coli STEC2018-553 RM systems
Ref: Nusch-Inderbinnen,M. et al. unpublished
REBASE ref # 32710
| Sequence length: | GenBank #: | |
| Chromosome: | 5,442,466 bp | CP075665 |
| plasmid pSTEC2018_553-a: | 129,935 bp | CP075666 |
| plasmid pSTEC2018_553-b: | 48,758 bp | CP075667 |
REBASE acronym: Eco18553
Org_num: 50737
All begin JFY30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22180 | 428 aa hypothetical protein | |||
| 22185 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco18553ORF22190P |
| 22190 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco18553ORF22190P |
| 22195 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2490 | phosphohydrolase | |||
| 2495 | M | M.EcoS19141DcmP (100% identity) | CCWGG | M.Eco18553DcmP |
| 2500 | V | V.SsoSE61DcmP (100% identity) | V.Eco18553DcmP | |
| 2505 | drug/metabolite exporter YedA | |||
| 3750 | integration host factor subunit alpha | |||
| 3755 | M | M.Eco3121ORFJP (100% identity) | M.Eco18553ORF3755P | |
| 3760 | Com family DNA-binding transcriptional | |||
| 6605 | SAM-dependent DNA methyltransferase | |||
| 6625 | M | M.Eco3121ORFKP (100% identity) | M.Eco18553ORF6625P | |
| 6630 | TrmB family transcriptional regulator | |||
| 8365 | regulator | |||
| 8370 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco18553ORF8370P |
| 8375 | DUF1382 family protein | |||
| 10880 | LexA family transcriptional regulator | |||
| 10885 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco18553ORF10885P |
| 10890 | PerC family transcriptional regulator | |||
| 13635 | complement resistance protein TraT | |||
| ??? | S | S.EcoR43ORF19470P (100% identity) | S.Eco18553ORF13650P | |
| 13650 | RM | EcoR43ORF19470P (100% identity) | Eco18553ORF13650P | |
| 13655 | urease subunit beta | |||
| 13665 | CcdB family protein | |||
| 13670 | M | M.Eco3121ORFPP (100% identity) | M.Eco18553ORF13670P | |
| 13675 | R | EcoR9ORF18300P (100% identity) | Eco18553ORF13670P | |
| 13680 | IS66 family insertion sequence element accessory | |||
| 15605 | DNA-binding transcriptional regulator Fis | |||
| 15610 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco18553ORF15610P |
| 15615 | DUF2556 family protein | |||
| 16160 | ribulose-phosphate 3-epimerase | |||
| 16165 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco18553DamP |
| 16170 | cell division protein DamX | |||
| 22205 | AAA family ATPase | |||
| 22210 | R | SflN101ORF11875P (100% identity) | Eco18553ORF22210P | |
| 22215 | HNH endonuclease | |||
| 22630 | PerC family transcriptional regulator | |||
| 22635 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.Eco18553ORF22635P |
| 22640 | LexA family transcriptional regulator | |||
| 25325 | ASCH domain-containing protein | |||
| 25330 | M | M.EcoO81Dam5P (92% identity) | GATC | M.Eco18553ORF25330P |
| 25335 | replication endonuclease | |||
| 26870 | DUF1382 family protein | |||
| 26875 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco18553ORF26875P |
| 26880 | regulator | |||
| 26980 | Rha family transcriptional regulator | |||
| 26985 | R | Sso1099IP (100% identity) | CTGCAG | Eco18553ORF26990P |
| 26990 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco18553ORF26990P |
| 26995 | LexA family transcriptional regulator | |||
| plasmid pSTEC2018_553-a | ||||
| 27325 | 104 aa hypothetical protein | |||
| 27330 | M | M.EcoSTEC636ORF25980P (100% identity) | SAY | M.Eco18553ORF27330P |
| 27335 | 73 aa hypothetical protein | |||
| plasmid pSTEC2018_553-b | ||||
| 28000 | 73 aa hypothetical protein | |||
| 28005 | M | M.SflN92ORF24820P (100% identity) | M.Eco18553ORF28005P | |
| 28010 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13550 | IS1-like element IS1A family transposase | |||
| 13555 | M | M.Eco3121ORFBP (98% identity) | M.Eco18553ORF13555P | |
| 13560 | R | Eco3121ORFBP (100% identity) | Eco18553ORF13555P | |
| 13565 | DUF1281 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22195 | 128 aa hypothetical protein | |||
| 22200 | R | EcohubtMcrCP (100% identity) | Eco18553McrCP | |
| 22205 | R | Eco3121McrBP (99% identity) | Eco18553McrBP | |
| 22210 | HNH endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1485 | PerC family transcriptional regulator | |||
| 1490 | M | M.EcoG8ORF8555P (100% identity) | GATC | M.Eco18553ORF1490P |
| 1495 | LexA family transcriptional regulator | |||