Escherichia coli STEC2017-197 |
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Putative Escherichia coli STEC2017-197 RM systems
Ref: Nusch-Inderbinnen,M. et al. unpublished
REBASE ref # 32710
| Sequence length: | GenBank #: | |
| Chromosome: | 5,013,656 bp | CP075663 |
| plasmid pSTEC17_197-a: | 118,523 bp | CP075664 |
REBASE acronym: Eco17197
Org_num: 50736
All begin JFX55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6260 | transcription factor | |||
| 6265 | M | M.EcoSTEC639ORF18270P (100% identity) | M.Eco17197ORF6265P | |
| 6270 | S | S.EcoSTEC639ORF18270P (100% identity) | S.Eco17197ORF6265P | |
| 6275 | DUF4433 domain-containing protein | |||
| 6280 | macro domain-containing protein | |||
| 6285 | R | EcoSTEC639ORF18270P (100% identity) | Eco17197ORF6265P | |
| 6290 | M48 family metallopeptidase | |||
| 12850 | restriction endonuclease subunit M | |||
| 12855 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.Eco17197ORF12855P |
| 12860 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco17197ORF12855P |
| 12865 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco17197ORF12855P |
| 12870 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 720 | phosphohydrolase | |||
| 725 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco17197DcmP |
| 730 | V | V.SsoSE61DcmP (100% identity) | V.Eco17197DcmP | |
| 735 | drug/metabolite exporter YedA | |||
| 4545 | cell envelope integrity protein TolA | |||
| 4560 | M | M.EcoAVFP2ORFAP (100% identity) | M.Eco17197ORF4560P | |
| 4565 | TrmB family transcriptional regulator | |||
| 5555 | Shiga toxin Stx2d subunit A | |||
| 5575 | M | M.EcoP15385ORF8755P (100% identity) | M.Eco17197ORF5575P | |
| 5580 | TrmB family transcriptional regulator | |||
| 6880 | Shiga toxin Stx2d subunit A | |||
| 6900 | M | M.EcoB2F1ORFAP (100% identity) | M.Eco17197ORF6900P | |
| 6905 | TrmB family transcriptional regulator | |||
| 9685 | DUF1317 domain-containing protein | |||
| 9690 | M | M.Sbo812ORFAP (100% identity) | M.Eco17197ORF9690P | |
| 9695 | cell division protein ZapA | |||
| 12825 | HNH endonuclease | |||
| 12830 | R | EcoWCTORF19980P (100% identity) | Eco17197ORF12830P | |
| 12835 | McrC family protein | |||
| 17515 | cell division protein DamX | |||
| 17520 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco17197DamP |
| 17525 | ribulose-phosphate 3-epimerase | |||
| 18070 | DUF2556 family protein | |||
| 18075 | M | M.EcoP15385ORF20695P (100% identity) | ATGCAT | M.Eco17197ORF18075P |
| 18080 | DNA-binding transcriptional regulator Fis | |||
| plasmid pSTEC17_197-a | ||||
| 24850 | 73 aa hypothetical protein | |||
| 24855 | M | M.EcoP15385ORF24580P (100% identity) | M.Eco17197ORF24855P | |
| 24860 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12830 | HNH endonuclease | |||
| 12835 | R | EcoZ151McrCP (100% identity) | Eco17197McrCP | |
| 12840 | R | SflSTLE4McrBP (100% identity) | Eco17197McrBP | |
| 12845 | IS3-like element IS3 family transposase | |||