Escherichia coli 2018-166 |
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Putative Escherichia coli 2018-166 RM systems
Ref: Nusch-Inderbinnen,M. et al. unpublished
REBASE ref # 32710
| Sequence length: | GenBank #: | |
| Chromosome: | 5,201,011 bp | CP075632 |
| plasmid pSTEC2018_166-a: | 120,601 bp | CP075633 |
| plasmid pSTEC2018_166-c: | 119,130 bp | CP075634 |
REBASE acronym: Eco2018166
Org_num: 50594
All begin JFX80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13770 | 128 aa hypothetical protein | |||
| 13775 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco2018166ORF13775P |
| 13780 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco2018166ORF13775P |
| 13785 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 780 | PerC family transcriptional regulator | |||
| 785 | M | M.Eco2448ORFGP (100% identity) | GATC | M.Eco2018166ORF785P |
| 790 | LexA family transcriptional regulator | |||
| 1795 | phosphohydrolase | |||
| 1800 | M | M.EcoS19141DcmP (100% identity) | CCWGG | M.Eco2018166DcmP |
| 1805 | V | V.SsoSE61DcmP (100% identity) | V.Eco2018166DcmP | |
| 1810 | drug/metabolite exporter YedA | |||
| 5635 | SAM-dependent DNA methyltransferase | |||
| 5655 | M | M.Eco3121ORFKP (100% identity) | M.Eco2018166ORF5655P | |
| 5660 | TrmB family transcriptional regulator | |||
| 10140 | LexA family transcriptional regulator | |||
| 10145 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco2018166ORF10145P |
| 10150 | PerC family transcriptional regulator | |||
| 13750 | HNH endonuclease | |||
| 13755 | R | SflN101ORF11875P (100% identity) | Eco2018166ORF13755P | |
| 13760 | AAA family ATPase | |||
| 13870 | Polarity suppression protein | |||
| 13875 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2018166ORF13875P |
| 13880 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2018166ORF13875P |
| 13885 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2018166ORF13875P |
| 13890 | site-specific integrase | |||
| 19265 | cell division protein DamX | |||
| 19270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2018166DamP |
| 19275 | ribulose-phosphate 3-epimerase | |||
| 19825 | DUF2556 family protein | |||
| 19830 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco2018166ORF19830P |
| 19835 | DNA-binding transcriptional regulator Fis | |||
| 23370 | ASCH domain-containing protein | |||
| 23375 | M | M.EcoO81Dam5P (92% identity) | GATC | M.Eco2018166ORF23375P |
| 23380 | replication endonuclease | |||
| 25655 | YXWGXW repeat-containing protein | |||
| 25660 | RM | Eco955ORF8695P (100% identity) | Eco2018166ORF25660P | |
| 25665 | S | S1.Eco955ORF8695P (96% identity) | S.Eco2018166ORF25660P | |
| 25670 | DUF1737 domain-containing protein | |||
| plasmid pSTEC2018_166-a | ||||
| 26165 | 101 aa hypothetical protein | |||
| 26170 | M | M.SflN92ORF24820P (100% identity) | M.Eco2018166ORF26170P | |
| 26175 | 73 aa hypothetical protein | |||
| plasmid pSTEC2018_166-c | ||||
| 26530 | 104 aa hypothetical protein | |||
| 26535 | M | M.EcoSTEC636ORF25980P (100% identity) | SAY | M.Eco2018166ORF26535P |
| 26540 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13755 | HNH endonuclease | |||
| 13760 | R | Eco3121McrBP (100% identity) | Eco2018166McrBP | |
| 13765 | R | EcohubtMcrCP (100% identity) | Eco2018166McrCP | |
| 13770 | 128 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13325 | LexA family transcriptional regulator | |||
| 13330 | M | M.EcoG8ORF8555P (100% identity) | GATC | M.Eco2018166ORF13330P |
| 13335 | PerC family transcriptional regulator | |||