Salmonella enterica CFSAN012373 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica CFSAN012373 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,701,728 bp
GenBank #: CP075043
REBASE acronym: Sens12373
Org_num: 51478
All begin QW44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19405 | restriction endonuclease | |||
| 19410 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sens12373ORF19415P |
| 19415 | M | M.SenZ223ORF22565P (100% identity) | GAGNNNNNNRTAYG | M.Sens12373ORF19415P |
| 19420 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sens12373ORF19415P |
| 19425 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | cell division protein DamX | |||
| 1935 | M | M.StyTDamP (100% identity) | GATC | M.Sens12373DamP |
| 1940 | ribulose-phosphate 3-epimerase | |||
| 2420 | DUF2556 family protein | |||
| 2425 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sens12373ORF2425P |
| 2430 | DNA-binding transcriptional regulator Fis | |||
| 8575 | IS6-like element IS26 family transposase | |||
| 8580 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sens12373ORF8585P |
| 8585 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Sens12373ORF8585P |
| 8590 | IS1 family transposase | |||
| 9230 | helix-turn-helix domain-containing protein | |||
| 9235 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sens12373ORF9235P |
| 9240 | LexA family transcriptional regulator | |||
| 14085 | YqaJ viral recombinase family protein | |||
| 14090 | M | M.SenZ223ORF5255P (100% identity) | GATC | M.Sens12373ORF14090P |
| 14095 | DUF4060 family protein | |||
| 19545 | YebC/PmpR family DNA-binding transcriptional | |||
| 19550 | R | SenS321ORF21620P (100% identity) | Sens12373ORF19550P | |
| 19555 | fosfomycin resistance glutathione transferase | |||
| 19575 | RM | SenZ223ORF22395P (100% identity) | GATCAG | Sens12373ORF19575P |
| 19580 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17175 | 33 aa hypothetical protein | |||
| 17180 | R | SenUA13ORF3464P (100% identity) | Sens12373ORF17180P | |
| 17185 | site-specific DNA-methyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19400 | BrnT family toxin | |||
| 19405 | R | StyUK1MrrP (100% identity) | Sens12373MrrP | |
| 19410 | type I restriction-modification system | |||