Salmonella enterica subsp. enterica serovar Dublin CFSAN022635 |
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Putative Salmonella enterica subsp. enterica serovar Dublin CFSAN022635 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,847,006 bp
GenBank #: CP075021
REBASE acronym: Sen22635
Org_num: 51581
All begin AA326_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20295 | NERD domain-containing protein | |||
| 20300 | S | S2.Ssp3CORF11555P (100% identity) | S.Sen22635ORF20300P | |
| 20305 | N-6 DNA methylase | |||
| 20310 | restriction endonuclease | |||
| 20315 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen22635ORF20315P |
| 20320 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen22635ORF20315P |
| 20325 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen22635ORF20315P |
| 20330 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.Sen22635DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22635ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 5450 | TraR/DksA family transcriptional regulator | |||
| 5455 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen22635ORF5455P |
| 5460 | replication endonuclease | |||
| 9030 | 249 aa hypothetical protein | |||
| 9035 | M | M.Ssp3CORF22905P (100% identity) | M.Sen22635ORF9035P | |
| 9040 | ead/Ea22-like family protein | |||
| 9105 | PerC family transcriptional regulator | |||
| ??? | M | M.Sen59898ORF9120P (100% identity) | M.Sen22635ORF9110P | |
| 9115 | RusA family crossover junction | |||
| 13980 | drug/metabolite exporter YedA | |||
| 13985 | V | V.StyUK1DcmP (100% identity) | V.Sen22635DcmP | |
| 13990 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen22635DcmP |
| 13995 | phosphohydrolase | |||
| 14765 | DUF550 domain-containing protein | |||
| 14770 | M | M.Ssp3CORF17125P (100% identity) | M.Sen22635ORF14770P | |
| 14775 | ead/Ea22-like family protein | |||
| 20440 | YebC/PmpR family DNA-binding transcriptional | |||
| 20445 | R | SspSAL045ORF19515P (100% identity) | Sen22635ORF20445P | |
| 20450 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18105 | 33 aa hypothetical protein | |||
| 18110 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen22635ORF18115P |
| 18115 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen22635ORF18115P |
| 18120 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20305 | N-6 DNA methylase | |||
| 20310 | R | Ssp3CMrrP (100% identity) | Sen22635MrrP | |
| 20315 | type I restriction-modification system subunit | |||