Salmonella enterica subsp. enterica CFSAN029662 |
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Putative Salmonella enterica subsp. enterica CFSAN029662 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,793,314 bp
GenBank #: CP074647
REBASE acronym: Sen29662
Org_num: 51550
All begin VL99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19655 | restriction endonuclease | |||
| 19660 | R | SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | Sen29662ORF19665P |
| 19665 | M | M.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | M.Sen29662ORF19665P |
| 19670 | S | S.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | S.Sen29662ORF19665P |
| 19675 | endoribonuclease SymE | |||
| 19880 | DUF932 domain-containing protein | |||
| 19885 | R | SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | Sen29662ORF19890P |
| 19890 | M | M.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | M.Sen29662ORF19890P |
| 19895 | S | S.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | S.Sen29662ORF19890P |
| 19900 | 355 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1765 | cell division protein DamX | |||
| 1770 | M | M.SenSW70DamP (100% identity) | GATC | M.Sen29662DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.SenSW70ORF2260P (100% identity) | ATGCAT | M.Sen29662ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 5810 | DUF4060 family protein | |||
| 5815 | M | M.SenSW70ORF5830P (100% identity) | M.Sen29662ORF5815P | |
| 5820 | YqaJ viral recombinase family protein | |||
| 5895 | ead/Ea22-like family protein | |||
| 5900 | M | M.SenSW70ORF5920P (100% identity) | M.Sen29662ORF5900P | |
| 5905 | DUF550 domain-containing protein | |||
| 9160 | phosphohydrolase | |||
| 9165 | M | M.SenSW70Dcm2P (100% identity) | CCWGG | M.Sen29662DcmP |
| 9170 | V | V.StyUK1DcmP (100% identity) | V.Sen29662DcmP | |
| 9175 | drug/metabolite exporter YedA | |||
| 13500 | Rrf2 family transcriptional regulator | |||
| 13505 | M | M.SenSW70ORF13270P (100% identity) | M1.Sen29662ORF13505P | |
| 13510 | M | M.SenSW70ORF13275P (100% identity) | M2.Sen29662ORF13505P | |
| 13515 | PerC family transcriptional regulator | |||
| 19795 | YebC/PmpR family DNA-binding transcriptional | |||
| 19800 | R | SenSW70ORF19560P (100% identity) | Sen29662ORF19800P | |
| 19805 | 64 aa hypothetical protein | |||
| 19905 | 5-nucleotidase | |||
| 19910 | R | SenSW70ORF19670P (100% identity) | Sen29662ORF19910P | |
| 19915 | helix-turn-helix transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17435 | 33 aa hypothetical protein | |||
| 17440 | R | SenWC80ORFAP (99% identity) | CAGAG | Sen29662ORF17445P |
| 17445 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen29662ORF17445P |
| 17450 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19650 | BrnT family toxin | |||
| 19655 | R | StyTMrrP (100% identity) | Sen29662MrrP | |
| 19660 | type I restriction-modification system | |||