Dickeya dianthicola DDI_ME30 |
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Putative Dickeya dianthicola DDI_ME30 RM systems
Ref: Ge,T. unpublished
REBASE ref # 32309
Complete sequence: 4,909,151 bp
GenBank #: CP076042
REBASE acronym: DdiME30
Org_num: 50507
All begin IAF04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3280 | 124 aa hypothetical protein | |||
| 3285 | S | S2.DdiPA24ORF3290P (100% identity) | S2.DdiME30ORF3295P | |
| 3290 | S | S1.DdiPA24ORF3290P (100% identity) | S1.DdiME30ORF3295P | |
| 3295 | M | M.DdiPA24ORF3290P (100% identity) | M.DdiME30ORF3295P | |
| 3300 | R | DdiPA24ORF3290P (100% identity) | DdiME30ORF3295P | |
| 3305 | ribosomal protein S18-alanine | |||
| 4595 | M48 family metallopeptidase | |||
| 4600 | R | DdiPA24ORF4615P (100% identity) | DdiME30ORF4625P | |
| 4605 | macro domain-containing protein | |||
| 4610 | DUF4433 domain-containing protein | |||
| 4615 | DUF4433 domain-containing protein | |||
| 4620 | S | S.DdiPA24ORF4615P (100% identity) | S.DdiME30ORF4625P | |
| 4625 | M | M.DdiPA24ORF4615P (100% identity) | M.DdiME30ORF4625P | |
| 4630 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | LysE/ArgO family amino acid transporter | |||
| 2185 | V | V.DdiPA24ORF2190P (100% identity) | V.DdiME30ORF2190P | |
| 2190 | M | M.DdiME23ORF443P (100% identity) | M.DdiME30ORF2190P | |
| 2195 | R | DdiPA24ORF2190P (100% identity) | DdiME30ORF2190P | |
| 2200 | MFS transporter | |||
| 3940 | 76 aa hypothetical protein | |||
| 3945 | M | M.DdiPA24ORF3940P (100% identity) | M1.DdiME30ORF3945P | |
| 3950 | M | M.DdiPA24ORF3945P (100% identity) | M2.DdiME30ORF3945P | |
| 3955 | replication endonuclease | |||
| 3955 | replication endonuclease | |||
| 3960 | R | DdiPA24ORF3960P (100% identity) | DdiME30ORF3965P | |
| 3965 | M | M.DdiPA24ORF3960P (100% identity) | M.DdiME30ORF3965P | |
| 3970 | 51 aa hypothetical protein | |||
| 7350 | 857 aa hypothetical protein | |||
| 7355 | M | M.DdiPA24ORF7340P (100% identity) | M.DdiME30ORF7355P | |
| 7360 | DUF1738 domain-containing protein | |||
| 7790 | phosphonate metabolism protein PhnP | |||
| 7795 | R | DdiPA24ORF7785P (100% identity) | DdiME30ORF7800P | |
| 7800 | M | M.DdiPA24ORF7785P (100% identity) | M.DdiME30ORF7800P | |
| 7805 | phosphonate ABC transporter ATP-binding protein | |||
| 15950 | type II secretion system pilot lipoprotein GspS | |||
| ??? | R | DdiME23ORF3176P (100% identity) | DdiME30ORF15960P | |
| 15960 | M | M.DdiPA24ORF15945P (100% identity) | M.DdiME30ORF15960P | |
| 15965 | recombinase family protein | |||
| 15950 | type II secretion system pilot lipoprotein GspS | |||
| 15955 | R | DdiPA24ORF15945P (100% identity) | DdiME30ORF15955P | |
| 15960 | DNA cytosine methyltransferase | |||
| 16215 | 222 aa hypothetical protein | |||
| 16220 | M | M.DdiPA24ORF16205P (100% identity) | M.DdiME30ORF16220P | |
| 16225 | 67 aa hypothetical protein | |||
| 20295 | ribulose-phosphate 3-epimerase | |||
| 20300 | M | M.Dsp2401ORFJP (100% identity) | GATC | M.DdiME30DamP |
| 20305 | SPOR domain-containing protein | |||