Clostridioides difficile MT5121 |
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Putative Clostridioides difficile MT5121 RM systems
Ref: Gonzales-Luna,A.J. et al. Anaerobe (2021) In press
REBASE ref # 32666
Complete sequence: 3,998,712 bp
GenBank #: CP075685
REBASE acronym: CdiMT5121
Org_num: 50465
All begin KK112_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2275 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| ??? | C | C.Pdi120IIP (100% identity) | C.CdiMT5121ORF2285P | |
| 2285 | M | M1.Pdi120II (100% identity) | ACGGC | M1.CdiMT5121ORF2285P |
| 2290 | M | M2.Pdi120II (100% identity) | ACGGC | M2.CdiMT5121ORF2285P |
| 2295 | 257 aa hypothetical protein | |||
| 2300 | R | R1.Pdi120IIP (100% identity) | ACGGC | R1.CdiMT5121ORF2285P |
| 2305 | R | R2.Pdi120IIP (100% identity) | R2.CdiMT5121ORF2285P | |
| 2310 | CGNR zinc finger domain-containing protein | |||
| 2385 | methionine adenosyltransferase | |||
| 2390 | M | M.Pdi120ORFBP (100% identity) | M.CdiMT5121ORF2390P | |
| 2395 | virulence protein | |||
| 13975 | patatin-like phospholipase family protein | |||
| 13980 | M | M.Pdi120I (100% identity) | CAAAAA | M.CdiMT5121ORF13980P |
| 13985 | Rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10520 | sigma 54-interacting transcriptional regulator | |||
| 10525 | R | Pdi120McrCP (100% identity) | CdiMT5121McrCP | |
| 10530 | R | Pdi120McrBP (100% identity) | CdiMT5121McrBP | |
| 10535 | cell division protein | |||